Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H22
(542 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 32 0.23
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 32 0.23
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 32 0.23
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 32 0.23
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 32 0.23
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 32 0.23
Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical pr... 30 0.94
AL032624-2|CAA21520.2| 447|Caenorhabditis elegans Hypothetical ... 30 0.94
U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical p... 30 1.2
AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 prot... 30 1.2
AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 prot... 30 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.2
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 29 2.2
AC084152-8|AAK39317.1| 541|Caenorhabditis elegans Hypothetical ... 29 2.9
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 28 3.8
U67954-6|AAV28344.1| 452|Caenorhabditis elegans Wrapper/rega-1/... 28 5.0
U67954-5|AAM54179.1| 444|Caenorhabditis elegans Wrapper/rega-1/... 27 6.6
U67954-4|AAM54180.1| 345|Caenorhabditis elegans Wrapper/rega-1/... 27 6.6
U67954-3|AAM54178.1| 436|Caenorhabditis elegans Wrapper/rega-1/... 27 6.6
U29487-1|AAA68768.1| 253|Caenorhabditis elegans 2 (zwei) ig-dom... 27 6.6
AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobuli... 27 6.6
AF456363-1|AAL60234.1| 443|Caenorhabditis elegans immunoglobuli... 27 6.6
AF456362-1|AAL60233.1| 435|Caenorhabditis elegans immunoglobuli... 27 6.6
AF456251-1|AAL59609.1| 253|Caenorhabditis elegans secreted 2-im... 27 6.6
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 8.7
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 8.7
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 8.7
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 8.7
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 8.7
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 8.7
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 3036 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 3095
Query: 185 SSASV 199
S+
Sbjct: 3096 KELSI 3100
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2943 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2984
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 2396 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 2455
Query: 185 SSASV 199
S+
Sbjct: 2456 KELSI 2460
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2303 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2344
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 3036 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 3095
Query: 185 SSASV 199
S+
Sbjct: 3096 KELSI 3100
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2943 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2984
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 3036 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 3095
Query: 185 SSASV 199
S+
Sbjct: 3096 KELSI 3100
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2943 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2984
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 2396 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 2455
Query: 185 SSASV 199
S+
Sbjct: 2456 KELSI 2460
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2303 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2344
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 11 KDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVT--VHVVQSETPAAMQHGNN 184
++ + V + + I +E H G YTC+ N + S T VQ E P + N
Sbjct: 3036 QESITVESVEGVERVTITSSELSHQGKYTCIAENTEGTSKTEAFLTVQGEAPVFTKELQN 3095
Query: 185 SSASV 199
S+
Sbjct: 3096 KELSI 3100
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 35 GRQTSELVIGKAEPRHAGNYTCVPANA---KAASVTVHVVQS 151
G T ELV+ P AG YTC+ N T+ V++S
Sbjct: 2943 GHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTVIES 2984
>Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical
protein C50C10.6 protein.
Length = 347
Score = 30.3 bits (65), Expect = 0.94
Identities = 19/96 (19%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +2
Query: 215 FVYLFVNIISLRILLIQTHHEFG*RIFMVEYTNLYS---AIINKYL-CKINSVKKMLKFN 382
F+ +F N+ + ++L ++ G +++ YT+++ + +N + C + + F
Sbjct: 19 FISIFTNLFLIYLILKRSPDALGLYKWLMMYTSIFELTYSFVNLFAGCSVRTFGS--AFI 76
Query: 383 IFFSWRNLSQFYQLLLRNYCEF*NLQLDVSKC*FTF 490
+F ++ Q + NYC F L + C F +
Sbjct: 77 VFRKDQHFHLISQFMAVNYCSFFGFSLAIIACHFIY 112
>AL032624-2|CAA21520.2| 447|Caenorhabditis elegans Hypothetical
protein Y49A10A.1 protein.
Length = 447
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 211 RFRIFICKYYIPQDTSDTNSP*IRIT-YLYGRIY 309
R RIF Y++ DT N P + T YL+GRI+
Sbjct: 97 RIRIFKINYHLNDDTITVNEPFVDNTGYLHGRIF 130
>U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical
protein EEED8.2 protein.
Length = 299
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 305 YTNLYSAIINKYLCKINSVKKMLKFNIFFSWRNLSQFYQLLLRNYC 442
+ +L+ I + + V K+ F+ FF+ +++SQF+ L+++N C
Sbjct: 138 FFSLHENPIQRTISGTWKVIKISNFDEFFAAQDISQFHALIIKNQC 183
>AY130758-5|AAN61521.1| 2693|Caenorhabditis elegans 301KDa_2 protein
protein.
Length = 2693
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSASVLKIHAFV 220
L I +A H G Y C +N A T +V E P A +H V K+ V
Sbjct: 1046 LKIYEAHEEHNGQYVCKVSNKLGAVETRAIVVVEAPDAAEHVTQMPTFVKKLQDVV 1101
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 14 DGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAA 166
DG + + S L+I + +H G Y C N + ++ SE +A
Sbjct: 2633 DGYTITSSDTNSSLLINSVDKKHFGEYLCTIRNQNGEELANAMILSEGSSA 2683
>AY130758-4|AAN61520.1| 2708|Caenorhabditis elegans 301KDa_1 protein
protein.
Length = 2708
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSASVLKIHAFV 220
L I +A H G Y C +N A T +V E P A +H V K+ V
Sbjct: 1061 LKIYEAHEEHNGQYVCKVSNKLGAVETRAIVVVEAPDAAEHVTQMPTFVKKLQDVV 1116
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 14 DGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAA 166
DG + + S L+I + +H G Y C N + ++ SE +A
Sbjct: 2648 DGYTITSSDTNSSLLINSVDKKHFGEYLCTIRNQNGEELANAMILSEGSSA 2698
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSASVLKIHAFV 220
L I +A H G Y C +N A T +V E P A +H V K+ V
Sbjct: 16872 LKIYEAHEEHNGQYVCKVSNKLGAVETRAIVVVEAPDAAEHVTQMPTFVKKLQDVV 16927
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 14 DGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAA 166
DG + + S L+I + +H G Y C N + ++ SE +A
Sbjct: 18459 DGYTITSSDTNSSLLINSVDKKHFGEYLCTIRNQNGEELANAMILSEGSSA 18509
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSASVLKIHAFV 220
L I +A H G Y C +N A T +V E P A +H V K+ V
Sbjct: 16887 LKIYEAHEEHNGQYVCKVSNKLGAVETRAIVVVEAPDAAEHVTQMPTFVKKLQDVV 16942
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 14 DGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAA 166
DG + + S L+I + +H G Y C N + ++ SE +A
Sbjct: 18474 DGYTITSSDTNSSLLINSVDKKHFGEYLCTIRNQNGEELANAMILSEGSSA 18524
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPAN-AKAASVTVHVVQSETPAAMQHGNNSSASVL 202
L I +A+ GNY CV N A + +T HV E P + ++ +V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 KDG---VNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
KDG + + S+L I +A P A +Y+C+ N + V V TP
Sbjct: 2982 KDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGGAEAVFQVTVNTP 3034
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 5 EVKDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
EV D N+ Q L I + + HAG ++CV N V+ TP
Sbjct: 3807 EVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTP 3858
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPAN-AKAASVTVHVVQSETPAAMQHGNNSSASVL 202
L I +A+ GNY CV N A + +T HV E P + ++ +V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 KDG---VNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
KDG + + S+L I +A P A +Y+C+ N + V V TP
Sbjct: 2982 KDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGGAEAVFQVTVNTP 3034
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 5 EVKDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
EV D N+ Q L I + + HAG ++CV N V+ TP
Sbjct: 3807 EVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTP 3858
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPAN-AKAASVTVHVVQSETPAAMQHGNNSSASVL 202
L I +A+ GNY CV N A + +T HV E P + ++ +V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 KDG---VNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
KDG + + S+L I +A P A +Y+C+ N + V V TP
Sbjct: 2982 KDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGGAEAVFQVTVNTP 3034
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 5 EVKDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
EV D N+ Q L I + + HAG ++CV N V+ TP
Sbjct: 3807 EVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTP 3858
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPAN-AKAASVTVHVVQSETPAAMQHGNNSSASVL 202
L I +A+ GNY CV N A + +T HV E P + ++ +V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 KDG---VNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
KDG + + S+L I +A P A +Y+C+ N + V V TP
Sbjct: 2982 KDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGGAEAVFQVTVNTP 3034
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 5 EVKDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
EV D N+ Q L I + + HAG ++CV N V+ TP
Sbjct: 3807 EVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTP 3858
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 53 LVIGKAEPRHAGNYTCVPAN-AKAASVTVHVVQSETPAAMQHGNNSSASVL 202
L I +A+ GNY CV N A + +T HV E P + ++ +V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 KDG---VNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
KDG + + S+L I +A P A +Y+C+ N + V V TP
Sbjct: 2982 KDGQLDMRAQSSSDKSKLYIMQATPEDADSYSCIAVNDAGGAEAVFQVTVNTP 3034
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 5 EVKDGVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
EV D N+ Q L I + + HAG ++CV N V+ TP
Sbjct: 3807 EVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTP 3858
>AC084152-8|AAK39317.1| 541|Caenorhabditis elegans Hypothetical
protein Y102A11A.8 protein.
Length = 541
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 TSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPA-AMQHGNNSSASVLKIHAFV 220
T+ L I K + HAG Y CV +A+ V A S ++ + V
Sbjct: 337 TNRLTIHKVDYHHAGKYICVVTSAQGQIVYKSAELKVLSAYDFTFPFKSDGFLVLLAVVV 396
Query: 221 YLFVNIISLRILLIQTHHE 277
LF+ ++ L I+ ++ + E
Sbjct: 397 TLFIFVVILAIIWLKKNQE 415
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 348 LQRYLLIIALYKLVYSTIKIRYPNSW*VCIRSILRDIIFTN 226
L +Y+++ LY + + YPN W C S++ I+ TN
Sbjct: 421 LPQYIILPILYNTIVYWMSGLYPNFWNYCFASLV-TILITN 460
>U67954-6|AAV28344.1| 452|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform e
protein.
Length = 452
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETP 160
G ++ TS L I + EP ++ NY+C A + + V VQ P
Sbjct: 69 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQVFKP 116
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 178 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 214
>U67954-5|AAM54179.1| 444|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform b
protein.
Length = 444
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 69 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 112
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 170 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 206
>U67954-4|AAM54180.1| 345|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform c
protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 69 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 112
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 170 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 206
>U67954-3|AAM54178.1| 436|Caenorhabditis elegans
Wrapper/rega-1/klingon homologprotein 1, isoform a
protein.
Length = 436
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 69 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 112
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 170 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 206
>U29487-1|AAA68768.1| 253|Caenorhabditis elegans 2 (zwei) ig-domain
protein protein4 protein.
Length = 253
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 26 VNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSA 193
V+ G S L I ++G Y+CV N TV V+ E A+ N+ SA
Sbjct: 106 VDTGIVASILTIQCPSAENSGTYSCVGYNGHQTIETVAEVEIEGEASGCRSNHKSA 161
>AF456364-1|AAL60235.1| 344|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1C protein.
Length = 344
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 68 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 111
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 169 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 205
>AF456363-1|AAL60234.1| 443|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1B protein.
Length = 443
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 68 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 111
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 169 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 205
>AF456362-1|AAL60233.1| 435|Caenorhabditis elegans immunoglobulin
domain-containingprotein WRK-1A protein.
Length = 435
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 17 GVNVNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
G ++ TS L I + EP ++ NY+C A + + V VQ
Sbjct: 68 GYEISMEGSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQ 111
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 47 SELVIGKAEPRHAGNYTCVPAN---AKAASVTVHVVQ 148
+ +VI + + HAG Y C+ N + A++ +HV +
Sbjct: 169 ARIVITEVKKHHAGKYNCLAENIAGSDRATIDIHVAE 205
>AF456251-1|AAL59609.1| 253|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-4 protein.
Length = 253
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 26 VNNGRQTSELVIGKAEPRHAGNYTCVPANAKAASVTVHVVQSETPAAMQHGNNSSA 193
V+ G S L I ++G Y+CV N TV V+ E A+ N+ SA
Sbjct: 106 VDTGIVASILTIQCPSAENSGTYSCVGYNGHQTIETVAEVEIEGEASGCRSNHKSA 161
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2605 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2634
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2522 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2551
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2843 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2872
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2843 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2872
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2843 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2872
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 59 IGKAEPRHAGNYTCVPANAKAASVTVHVVQ 148
I + EPR +G + CV NA +V+ ++
Sbjct: 2538 IAQTEPRDSGEWKCVAKNAAGEAVSTATIE 2567
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,012,288
Number of Sequences: 27780
Number of extensions: 213570
Number of successful extensions: 737
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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