Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H21
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   0.70 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   0.92 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.5  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   6.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.6  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
 Frame = +2

Query: 188 PCSNTARYQSQSM-RPT---RPSVSTRTVYISNRNA 283
           PC+NTA Y+S++  +P+   +PS     V +S ++A
Sbjct: 65  PCNNTANYKSEAQNQPSSYKQPSSDMADVLLSLKHA 100


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +1

Query: 94  DGYCHIDNVTAITKITGWVNVTTNNENALKLALFKHGPISVAIDAAHKTFSFYSNG 261
           DG    DN+ A + IT W+ ++  +   L + +  +G     +DA+       S+G
Sbjct: 223 DGEWQRDNLNANSSITHWI-LSGADPQKLAIGIAFYGHAFTLVDASQHDLGSPSSG 277


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 391 NDGYVLMSMRENNCG 435
           N+GYV++ +R NN G
Sbjct: 651 NNGYVVLRLRANNPG 665


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 456 ISRCALDTTIIFSHRHKYVSIVAPHI 379
           I   A   T+    RH YV++  PH+
Sbjct: 484 IDSVACSKTVSDGIRHYYVNVTFPHL 509


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 340 NGHKYWLVKNSWSNMWGND 396
           N HK+ LV    S MW  D
Sbjct: 300 NPHKWLLVNFDCSTMWLKD 318


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 179 SSWPCSNTARYQSQSMRPTRPSVSTRTVYISN 274
           S+ P    ARY   S+  TRP +     YI++
Sbjct: 14  SNTPKDMNARYLPPSLSDTRPMLPYPQNYINS 45


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 293 PYGHPYQFDL 302


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 293 PYGHPYQFDL 302


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 293 PYGHPYQFDL 302


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 249 PYGHPYQFDL 258


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 293 PYGHPYQFDL 302


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 81  PYGHPYQFDL 90


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 510 PYQHPYVFSL 481
           PY HPY F L
Sbjct: 293 PYGHPYQFDL 302


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 380 LDQEFFTSQYLC 345
           L++EF  S+YLC
Sbjct: 100 LEREFHRSKYLC 111


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 380 LDQEFFTSQYLC 345
           L++EF  S+YLC
Sbjct: 120 LEREFHRSKYLC 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,745
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)