BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H21
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122222-1|AAM52734.1| 549|Drosophila melanogaster RE18380p pro... 252 2e-67
AE014296-2337|AAF49777.1| 549|Drosophila melanogaster CG8947-PA... 252 2e-67
AB011376-1|BAA86910.1| 549|Drosophila melanogaster homologue of... 252 2e-67
U75652-1|AAB18345.1| 341|Drosophila melanogaster cysteine prote... 124 9e-29
BT016071-1|AAV36956.1| 341|Drosophila melanogaster LP06554p pro... 124 9e-29
AF012089-1|AAB65749.1| 341|Drosophila melanogaster cysteine pro... 124 9e-29
AE013599-1805|AAM68566.1| 341|Drosophila melanogaster CG6692-PB... 124 9e-29
AE013599-1804|AAF58311.1| 341|Drosophila melanogaster CG6692-PA... 124 9e-29
AE013599-1803|AAM68565.1| 371|Drosophila melanogaster CG6692-PC... 124 9e-29
D31970-1|BAA06738.1| 254|Drosophila melanogaster cysteine prote... 117 1e-26
AY060710-1|AAL28258.1| 336|Drosophila melanogaster GH15170p pro... 102 3e-22
AE014297-396|AAF51924.1| 336|Drosophila melanogaster CG11459-PA... 102 3e-22
AE014134-1850|AAF52922.2| 338|Drosophila melanogaster CG5367-PA... 99 3e-21
BT003231-1|AAO24986.1| 614|Drosophila melanogaster LP08529p pro... 96 3e-20
AE014297-200|AAF52055.2| 614|Drosophila melanogaster CG12163-PA... 96 3e-20
AE014297-199|AAN13266.1| 475|Drosophila melanogaster CG12163-PB... 96 3e-20
AE014297-397|AAF51923.1| 274|Drosophila melanogaster CG1075-PA ... 86 2e-17
AY069609-1|AAL39754.1| 352|Drosophila melanogaster LD36817p pro... 86 3e-17
AE013599-1774|AAF58331.2| 352|Drosophila melanogaster CG6347-PA... 86 3e-17
AY047507-1|AAK77239.1| 390|Drosophila melanogaster GH01592p pro... 85 7e-17
AE013599-2490|AAS64820.1| 390|Drosophila melanogaster CG4847-PE... 85 7e-17
AE013599-2489|AAM70882.1| 390|Drosophila melanogaster CG4847-PC... 85 7e-17
AE013599-2488|AAM70881.1| 390|Drosophila melanogaster CG4847-PB... 85 7e-17
AE013599-2487|AAF57850.1| 390|Drosophila melanogaster CG4847-PA... 85 7e-17
AE013599-2486|AAM70880.1| 420|Drosophila melanogaster CG4847-PD... 85 7e-17
AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p pro... 69 3e-12
AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p pro... 69 3e-12
AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB... 69 3e-12
AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA... 69 3e-12
AY060640-1|AAL28188.1| 340|Drosophila melanogaster GH06546p pro... 53 3e-07
AE014298-1962|AAF48317.1| 340|Drosophila melanogaster CG10992-P... 53 3e-07
AY084123-1|AAL89861.1| 340|Drosophila melanogaster RE20049p pro... 48 6e-06
AE013599-1773|AAG22272.1| 340|Drosophila melanogaster CG6337-PA... 48 6e-06
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 28 8.6
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 28 8.6
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 28 8.6
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 28 8.6
>AY122222-1|AAM52734.1| 549|Drosophila melanogaster RE18380p
protein.
Length = 549
Score = 252 bits (618), Expect = 2e-67
Identities = 108/151 (71%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GGEDFR YQW+++ G +PTEE+YG YLGQDGYCH++NVT + I G+VNVT+N+ NA KL
Sbjct: 397 GGEDFRVYQWMLQSGGVPTEEEYGPYLGQDGYCHVNNVTLVAPIKGFVNVTSNDPNAFKL 456
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLVK 366
AL KHGP+SVAIDA+ KTFSFYS+GVY+EP CKN VD LDHAVLAVGYG +NG YWLVK
Sbjct: 457 ALLKHGPLSVAIDASPKTFSFYSHGVYYEPTCKNDVDGLDHAVLAVGYGSINGEDYWLVK 516
Query: 367 NSWSNMWGNDGYVLMSMRENNCGVQSAPTYV 459
NSWS WGNDGY+LMS ++NNCGV + PTYV
Sbjct: 517 NSWSTYWGNDGYILMSAKKNNCGVMTMPTYV 547
>AE014296-2337|AAF49777.1| 549|Drosophila melanogaster CG8947-PA
protein.
Length = 549
Score = 252 bits (618), Expect = 2e-67
Identities = 108/151 (71%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GGEDFR YQW+++ G +PTEE+YG YLGQDGYCH++NVT + I G+VNVT+N+ NA KL
Sbjct: 397 GGEDFRVYQWMLQSGGVPTEEEYGPYLGQDGYCHVNNVTLVAPIKGFVNVTSNDPNAFKL 456
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLVK 366
AL KHGP+SVAIDA+ KTFSFYS+GVY+EP CKN VD LDHAVLAVGYG +NG YWLVK
Sbjct: 457 ALLKHGPLSVAIDASPKTFSFYSHGVYYEPTCKNDVDGLDHAVLAVGYGSINGEDYWLVK 516
Query: 367 NSWSNMWGNDGYVLMSMRENNCGVQSAPTYV 459
NSWS WGNDGY+LMS ++NNCGV + PTYV
Sbjct: 517 NSWSTYWGNDGYILMSAKKNNCGVMTMPTYV 547
>AB011376-1|BAA86910.1| 549|Drosophila melanogaster homologue of
Sarcophaga 26,29kDaproteinase protein.
Length = 549
Score = 252 bits (618), Expect = 2e-67
Identities = 108/151 (71%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GGEDFR YQW+++ G +PTEE+YG YLGQDGYCH++NVT + I G+VNVT+N+ NA KL
Sbjct: 397 GGEDFRVYQWMLQSGGVPTEEEYGPYLGQDGYCHVNNVTLVAPIKGFVNVTSNDPNAFKL 456
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLVK 366
AL KHGP+SVAIDA+ KTFSFYS+GVY+EP CKN VD LDHAVLAVGYG +NG YWLVK
Sbjct: 457 ALLKHGPLSVAIDASPKTFSFYSHGVYYEPTCKNDVDGLDHAVLAVGYGSINGEDYWLVK 516
Query: 367 NSWSNMWGNDGYVLMSMRENNCGVQSAPTYV 459
NSWS WGNDGY+LMS ++NNCGV + PTYV
Sbjct: 517 NSWSTYWGNDGYILMSAKKNNCGVMTMPTYV 547
>U75652-1|AAB18345.1| 341|Drosophila melanogaster cysteine
proteinase 1 protein.
Length = 341
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 190 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 306
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 307 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>BT016071-1|AAV36956.1| 341|Drosophila melanogaster LP06554p
protein.
Length = 341
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 190 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 306
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 307 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>AF012089-1|AAB65749.1| 341|Drosophila melanogaster cysteine
proteinase-1 protein.
Length = 341
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 190 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 306
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 307 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>AE013599-1805|AAM68566.1| 341|Drosophila melanogaster CG6692-PB,
isoform B protein.
Length = 341
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 190 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 306
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 307 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>AE013599-1804|AAF58311.1| 341|Drosophila melanogaster CG6692-PA,
isoform A protein.
Length = 341
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 190 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 248
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 249 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 306
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 307 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>AE013599-1803|AAM68565.1| 371|Drosophila melanogaster CG6692-PC,
isoform C protein.
Length = 371
Score = 124 bits (298), Expect = 9e-29
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+++I +G + TE+ Y Y D CH + T G+ ++ +E +
Sbjct: 220 GGLMDNAFRYIKDNGGIDTEKSYP-YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAE 278
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
A+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 279 AVATVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 336
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ SA +Y L+
Sbjct: 337 KNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 371
>D31970-1|BAA06738.1| 254|Drosophila melanogaster cysteine
proteinase-1 precursor protein.
Length = 254
Score = 117 bits (281), Expect = 1e-26
Identities = 60/155 (38%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHG-LPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKL 186
GG A+ +I +G + TE+ Y Y D CH + G+ ++ +E +
Sbjct: 103 GGLMDNAFPYIKDNGGIDTEKSYP-YEAIDDSCHFNRAQVGATDRGFTDIPQGDEKKMPE 161
Query: 187 ALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLV 363
+ GP+SVAIDA+H++F FYS GVY EP+C LDH VL VG+G +G YWLV
Sbjct: 162 PVPTVGPVSVAIDASHESFQFYSEGVYNEPQC--DAQNLDHGVLVVGFGTDESGEDYWLV 219
Query: 364 KNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
KNSW WG+ G++ ++ +EN CG+ S +Y L+
Sbjct: 220 KNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 254
>AY060710-1|AAL28258.1| 336|Drosophila melanogaster GH15170p
protein.
Length = 336
Score = 102 bits (244), Expect = 3e-22
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLA 189
GG A+ + HG+ T+E Y Y G C + + ++G+V + +E L
Sbjct: 184 GGWVSVAFNYTRDHGIATKESYP-YEPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEV 242
Query: 190 LFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLVK 366
++ GP++V+ID H+ F YS GV P C++K +L H+VL VG+G YW++K
Sbjct: 243 VYNIGPVAVSIDHLHEEFDQYSGGVLSIPACRSKRQDLTHSVLLVGFGTHRKWGDYWIIK 302
Query: 367 NSWSNMWGNDGYVLMSMRENN-CGVQSAPTY 456
NS+ WG GY+ ++ NN CGV S P Y
Sbjct: 303 NSYGTDWGESGYLKLARNANNMCGVASLPQY 333
>AE014297-396|AAF51924.1| 336|Drosophila melanogaster CG11459-PA
protein.
Length = 336
Score = 102 bits (244), Expect = 3e-22
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Frame = +1
Query: 10 GGEDFRAYQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLA 189
GG A+ + HG+ T+E Y Y G C + + ++G+V + +E L
Sbjct: 184 GGWVSVAFNYTRDHGIATKESYP-YEPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEV 242
Query: 190 LFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLVK 366
++ GP++V+ID H+ F YS GV P C++K +L H+VL VG+G YW++K
Sbjct: 243 VYNIGPVAVSIDHLHEEFDQYSGGVLSIPACRSKRQDLTHSVLLVGFGTHRKWGDYWIIK 302
Query: 367 NSWSNMWGNDGYVLMSMRENN-CGVQSAPTY 456
NS+ WG GY+ ++ NN CGV S P Y
Sbjct: 303 NSYGTDWGESGYLKLARNANNMCGVASLPQY 333
>AE014134-1850|AAF52922.2| 338|Drosophila melanogaster CG5367-PA
protein.
Length = 338
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/138 (29%), Positives = 79/138 (57%)
Frame = +1
Query: 52 GLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLALFKHGPISVAIDAA 231
G+ ++DY Y+ + G C ++ +T W + +E A++ A+ GP++++I+A+
Sbjct: 208 GIMRDQDYP-YVARKGKCQFVPDLSVVNVTSWAILPVRDEQAIQAAVTHIGPVAISINAS 266
Query: 232 HKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLVKNSWSNMWGNDGYVLM 411
KTF YS+G+Y +P C + ++HA++ +G+ G YW++KN W WG +GY+ +
Sbjct: 267 PKTFQLYSDGIYDDPLCSSA--SVNHAMVVIGF----GKDYWILKNWWGQNWGENGYIRI 320
Query: 412 SMRENNCGVQSAPTYVLI 465
N CG+ + Y ++
Sbjct: 321 RKGVNMCGIANYAAYAIV 338
>BT003231-1|AAO24986.1| 614|Drosophila melanogaster LP08529p
protein.
Length = 614
Score = 95.9 bits (228), Expect = 3e-20
Identities = 59/162 (36%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +1
Query: 1 ARGGGEDFRAYQWIMK-HGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENA 177
A GG AY+ I GL E +Y Y + CH + + ++ G+V++ NE A
Sbjct: 455 ACNGGLMDNAYKAIKDIGGLEYEAEYP-YKAKKNQCHFNRTLSHVQVAGFVDLPKGNETA 513
Query: 178 LKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL---NGH 348
++ L +GPIS+ I+A FY GV K LDH VL VGYGV N H
Sbjct: 514 MQEWLLANGPISIGINA--NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH 571
Query: 349 K---YWLVKNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
K YW+VKNSW WG GY + +N CGV T ++
Sbjct: 572 KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613
>AE014297-200|AAF52055.2| 614|Drosophila melanogaster CG12163-PA,
isoform A protein.
Length = 614
Score = 95.9 bits (228), Expect = 3e-20
Identities = 59/162 (36%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +1
Query: 1 ARGGGEDFRAYQWIMK-HGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENA 177
A GG AY+ I GL E +Y Y + CH + + ++ G+V++ NE A
Sbjct: 455 ACNGGLMDNAYKAIKDIGGLEYEAEYP-YKAKKNQCHFNRTLSHVQVAGFVDLPKGNETA 513
Query: 178 LKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL---NGH 348
++ L +GPIS+ I+A FY GV K LDH VL VGYGV N H
Sbjct: 514 MQEWLLANGPISIGINA--NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH 571
Query: 349 K---YWLVKNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
K YW+VKNSW WG GY + +N CGV T ++
Sbjct: 572 KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 613
>AE014297-199|AAN13266.1| 475|Drosophila melanogaster CG12163-PB,
isoform B protein.
Length = 475
Score = 95.9 bits (228), Expect = 3e-20
Identities = 59/162 (36%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Frame = +1
Query: 1 ARGGGEDFRAYQWIMK-HGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENA 177
A GG AY+ I GL E +Y Y + CH + + ++ G+V++ NE A
Sbjct: 316 ACNGGLMDNAYKAIKDIGGLEYEAEYP-YKAKKNQCHFNRTLSHVQVAGFVDLPKGNETA 374
Query: 178 LKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL---NGH 348
++ L +GPIS+ I+A FY GV K LDH VL VGYGV N H
Sbjct: 375 MQEWLLANGPISIGINA--NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFH 432
Query: 349 K---YWLVKNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
K YW+VKNSW WG GY + +N CGV T ++
Sbjct: 433 KTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 474
>AE014297-397|AAF51923.1| 274|Drosophila melanogaster CG1075-PA
protein.
Length = 274
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 28 AYQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLALFKHGP 207
A+ + +G+ ++E Y Y ++G C D + + +V +T+N+E L ++K GP
Sbjct: 120 AFNFKRDYGIASKESYP-YKPENGECRWDRRKSTGTLREYVTLTSNDERELAKVVYKIGP 178
Query: 208 ISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGV-LNGHKYWLVKNSWSNM 384
+ V+ID H+ F Y G+ P C+N +L H+VL VG+ YW++KNS+
Sbjct: 179 VEVSIDHLHEEFDQYFGGILRTPSCRNTNYDLKHSVLLVGFETHPKWGDYWIIKNSYGTE 238
Query: 385 WGNDGY 402
WG GY
Sbjct: 239 WGESGY 244
>AY069609-1|AAL39754.1| 352|Drosophila melanogaster LD36817p
protein.
Length = 352
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Frame = +1
Query: 7 GGGEDFRAYQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTA-------ITKITGWVNVTTN 165
GG +++ +++I HG+ Y Y + C N TA + KI + +T
Sbjct: 197 GGFQEY-GFEYIRDHGVTLANKYP-YTQTEMQCR-QNETAGRPPRESLVKIRDYATITPG 253
Query: 166 NENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNG 345
+E +K + GP++ +++A +F YS G+Y + +C EL+H+V VGYG NG
Sbjct: 254 DEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQ--GELNHSVTVVGYGTENG 311
Query: 346 HKYWLVKNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
YW++KNS+S WG G++ ++ CG+ S +Y ++
Sbjct: 312 RDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYPIL 352
>AE013599-1774|AAF58331.2| 352|Drosophila melanogaster CG6347-PA
protein.
Length = 352
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Frame = +1
Query: 7 GGGEDFRAYQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTA-------ITKITGWVNVTTN 165
GG +++ +++I HG+ Y Y + C N TA + KI + +T
Sbjct: 197 GGFQEY-GFEYIRDHGVTLANKYP-YTQTEMQCR-QNETAGRPPRESLVKIRDYATITPG 253
Query: 166 NENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNG 345
+E +K + GP++ +++A +F YS G+Y + +C EL+H+V VGYG NG
Sbjct: 254 DEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQ--GELNHSVTVVGYGTENG 311
Query: 346 HKYWLVKNSWSNMWGNDGYV-LMSMRENNCGVQSAPTYVLI 465
YW++KNS+S WG G++ ++ CG+ S +Y ++
Sbjct: 312 RDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYPIL 352
>AY047507-1|AAK77239.1| 390|Drosophila melanogaster GH01592p
protein.
Length = 390
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 241 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 299
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 300 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 356
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 357 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 390
>AE013599-2490|AAS64820.1| 390|Drosophila melanogaster CG4847-PE,
isoform E protein.
Length = 390
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 241 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 299
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 300 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 356
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 357 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 390
>AE013599-2489|AAM70882.1| 390|Drosophila melanogaster CG4847-PC,
isoform C protein.
Length = 390
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 241 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 299
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 300 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 356
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 357 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 390
>AE013599-2488|AAM70881.1| 390|Drosophila melanogaster CG4847-PB,
isoform B protein.
Length = 390
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 241 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 299
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 300 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 356
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 357 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 390
>AE013599-2487|AAF57850.1| 390|Drosophila melanogaster CG4847-PA,
isoform A protein.
Length = 390
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 241 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 299
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 300 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 356
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 357 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 390
>AE013599-2486|AAM70880.1| 420|Drosophila melanogaster CG4847-PD,
isoform D protein.
Length = 420
Score = 84.6 bits (200), Expect = 7e-17
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 GGEDFRAYQWI--MKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALK 183
GG A+ +I ++ G+ E Y Y+ G C D + + G+ + +E LK
Sbjct: 271 GGFQEAAFCFIDEVQKGVSQEGAYP-YIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLK 329
Query: 184 LALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVLNGHKYWLV 363
+ GP++ +++ +T Y+ G+Y + +C NK E +H++L VGYG G YW+V
Sbjct: 330 KVVATLGPVACSVNGL-ETLKNYAGGIYNDDEC-NK-GEPNHSILVVGYGSEKGQDYWIV 386
Query: 364 KNSWSNMWGNDGYVLMSMRENNCGVQSAPTYVLI 465
KNSW + WG GY + +N C + +Y ++
Sbjct: 387 KNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV 420
>AY113377-1|AAM29382.1| 431|Drosophila melanogaster RE01730p
protein.
Length = 431
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 NNENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL- 339
N E + +F GP+ + ++ F YS GVY E K H+V VG+G
Sbjct: 320 NREADIMAEIFHSGPVQATM-RVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEH 378
Query: 340 NGHKYWLVKNSWSNMWGNDGYVLMSMRENNCGVQ 441
NG KYW+ NSW + WG GY + N CG++
Sbjct: 379 NGEKYWIAANSWGSWWGEHGYFRILRGSNECGIE 412
>AY060922-1|AAL28470.1| 430|Drosophila melanogaster GM06507p
protein.
Length = 430
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 NNENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL- 339
N E + +F GP+ + ++ F YS GVY E K H+V VG+G
Sbjct: 319 NREADIMAEIFHSGPVQATM-RVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEH 377
Query: 340 NGHKYWLVKNSWSNMWGNDGYVLMSMRENNCGVQ 441
NG KYW+ NSW + WG GY + N CG++
Sbjct: 378 NGEKYWIAANSWGSWWGEHGYFRILRGSNECGIE 411
>AE013599-3358|AAM68213.1| 431|Drosophila melanogaster CG3074-PB,
isoform B protein.
Length = 431
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 NNENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL- 339
N E + +F GP+ + ++ F YS GVY E K H+V VG+G
Sbjct: 320 NREADIMAEIFHSGPVQATM-RVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEH 378
Query: 340 NGHKYWLVKNSWSNMWGNDGYVLMSMRENNCGVQ 441
NG KYW+ NSW + WG GY + N CG++
Sbjct: 379 NGEKYWIAANSWGSWWGEHGYFRILRGSNECGIE 412
>AE013599-3357|AAF46818.2| 431|Drosophila melanogaster CG3074-PA,
isoform A protein.
Length = 431
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 163 NNENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYGVL- 339
N E + +F GP+ + ++ F YS GVY E K H+V VG+G
Sbjct: 320 NREADIMAEIFHSGPVQATM-RVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEH 378
Query: 340 NGHKYWLVKNSWSNMWGNDGYVLMSMRENNCGVQ 441
NG KYW+ NSW + WG GY + N CG++
Sbjct: 379 NGEKYWIAANSWGSWWGEHGYFRILRGSNECGIE 412
>AY060640-1|AAL28188.1| 340|Drosophila melanogaster GH06546p
protein.
Length = 340
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +1
Query: 166 NENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELD-HAVLAVGYGVLN 342
N ++ + +GP+ A ++ Y +GVY K EL HA+ +G+GV
Sbjct: 241 NVREIQEEIMTNGPVEGAF-TVYEDLILYKDGVYQHEHGK----ELGGHAIRILGWGVWG 295
Query: 343 GHK--YWLVKNSWSNMWGNDGYVLMSMRENNCGVQSA 447
K YWL+ NSW+ WG+ G+ + +++CG++S+
Sbjct: 296 EEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIESS 332
>AE014298-1962|AAF48317.1| 340|Drosophila melanogaster CG10992-PA
protein.
Length = 340
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +1
Query: 166 NENALKLALFKHGPISVAIDAAHKTFSFYSNGVYFEPKCKNKVDELD-HAVLAVGYGVLN 342
N ++ + +GP+ A ++ Y +GVY K EL HA+ +G+GV
Sbjct: 241 NVREIQEEIMTNGPVEGAF-TVYEDLILYKDGVYQHEHGK----ELGGHAIRILGWGVWG 295
Query: 343 GHK--YWLVKNSWSNMWGNDGYVLMSMRENNCGVQSA 447
K YWL+ NSW+ WG+ G+ + +++CG++S+
Sbjct: 296 EEKIPYWLIGNSWNTDWGDHGFFRILRGQDHCGIESS 332
>AY084123-1|AAL89861.1| 340|Drosophila melanogaster RE20049p
protein.
Length = 340
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Frame = +1
Query: 64 EEDY--GGYLGQDGYCHIDNVTAI-TKITGWVNVTTNNENALKLALFKHGPISVAIDAAH 234
E DY L G C + ++ K+ G+ V N++ A+ + P+ V + A
Sbjct: 201 EVDYPNNNSLKTPGMCQPPSSVSVGVKLAGYSTVADNDDAAVMRYVSNGFPVIVEYNPAT 260
Query: 235 KTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYG--VLNGHKYWLVKNSWSNMWGNDGYVL 408
F YS+GVY + + ++ VGY V + YW NS+ + WG +GY+
Sbjct: 261 FGFMQYSSGVYVQETRALTNPKSSQFLVVVGYDHDVDSNLDYWRCLNSFGDTWGEEGYIR 320
Query: 409 MSMREN 426
+ R N
Sbjct: 321 IVRRSN 326
>AE013599-1773|AAG22272.1| 340|Drosophila melanogaster CG6337-PA
protein.
Length = 340
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Frame = +1
Query: 64 EEDY--GGYLGQDGYCHIDNVTAI-TKITGWVNVTTNNENALKLALFKHGPISVAIDAAH 234
E DY L G C + ++ K+ G+ V N++ A+ + P+ V + A
Sbjct: 201 EVDYPNNNSLKTPGMCQPPSSVSVGVKLAGYSTVADNDDAAVMRYVSNGFPVIVEYNPAT 260
Query: 235 KTFSFYSNGVYFEPKCKNKVDELDHAVLAVGYG--VLNGHKYWLVKNSWSNMWGNDGYVL 408
F YS+GVY + + ++ VGY V + YW NS+ + WG +GY+
Sbjct: 261 FGFMQYSSGVYVQETRALTNPKSSQFLVVVGYDHDVDSNLDYWRCLNSFGDTWGEEGYIR 320
Query: 409 MSMREN 426
+ R N
Sbjct: 321 IVRRSN 326
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 346 HKYWLVKNSWSNMWGNDGYVLM 411
+KYWLV+N ++ + N YVL+
Sbjct: 1252 NKYWLVQNKYAEVISNLNYVLL 1273
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 346 HKYWLVKNSWSNMWGNDGYVLM 411
+KYWLV+N ++ + N YVL+
Sbjct: 1252 NKYWLVQNKYAEVISNLNYVLL 1273
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 346 HKYWLVKNSWSNMWGNDGYVLM 411
+KYWLV+N ++ + N YVL+
Sbjct: 1252 NKYWLVQNKYAEVISNLNYVLL 1273
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 346 HKYWLVKNSWSNMWGNDGYVLM 411
+KYWLV+N ++ + N YVL+
Sbjct: 1252 NKYWLVQNKYAEVISNLNYVLL 1273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,731,334
Number of Sequences: 53049
Number of extensions: 465793
Number of successful extensions: 1332
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -