Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H21
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   4.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   10.0 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   10.0 

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 162 RSDVHPSGYFCYRSDVIDVAVTVLSQVTAVV 70
           R DVH + Y C  S+ +   ++   QV AVV
Sbjct: 98  RQDVHSAAYRCVASNSVGRVLSRDVQVRAVV 128


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 162 RSDVHPSGYFCYRSDVIDVAVTVLSQVTAVV 70
           R DVH + Y C  S+ +   ++   QV AVV
Sbjct: 98  RQDVHSAAYRCVASNSVGRVLSRDVQVRAVV 128


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/54 (22%), Positives = 20/54 (37%)
 Frame = +1

Query: 31  YQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLAL 192
           Y +  K      E   G   + G CH D+   +       + TT N+  ++  L
Sbjct: 439 YYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVL 492


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/54 (22%), Positives = 20/54 (37%)
 Frame = +1

Query: 31  YQWIMKHGLPTEEDYGGYLGQDGYCHIDNVTAITKITGWVNVTTNNENALKLAL 192
           Y +  K      E   G   + G CH D+   +       + TT N+  ++  L
Sbjct: 439 YYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVL 492


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 285 FAFRFEIYTVRVETEGLVGRID 220
           F  R++ YT RVE    V R+D
Sbjct: 464 FEVRYDPYTQRVEILDSVDRLD 485


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/42 (23%), Positives = 17/42 (40%)
 Frame = -1

Query: 380 LDQEFFTSQYLCPFRTP*PTARTAWSSSSTLFLHFGSKYTPF 255
           +++    S ++ P R P     T W S  T+   F     P+
Sbjct: 181 IERNSHESXFVVPTRVPATCCTTXWWSXXTVAXTFKYSSKPY 222


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 395 SLPHILDQEFFTSQY 351
           +L H++ +EF+ SQY
Sbjct: 448 NLNHMMREEFYQSQY 462


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 415  MRENNCGVQSAPTYVL 462
            MRE   G++SA +YV+
Sbjct: 1178 MREAGRGIESAKSYVV 1193


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 498 PYVFSLSCRYSNEYISR 448
           PY+F     Y NE IS+
Sbjct: 239 PYIFQEVIDYGNEAISK 255


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,230
Number of Sequences: 438
Number of extensions: 2868
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)