Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H19
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   1.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   7.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 198 FHFNKYCIFPFTVRLSRTFSTT 133
           FHFNKY   P  + ++ +   T
Sbjct: 23  FHFNKYLCRPRRIEIAASLDLT 44


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +2

Query: 134 VVEKVLDKRTVKGKIQYLLKWKGYKEDE 217
           ++E +     +  K++++L WK YK  +
Sbjct: 104 LIEVISKLHKLDNKLKHMLIWKSYKRTQ 131


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 212 LLYNLSISINIVSFPSQYVY 153
           +LYN+ + +  VSF S ++Y
Sbjct: 43  ILYNIILQVLFVSFVSYWLY 62


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 212 LLYNLSISINIVSFPSQYVY 153
           +LYN+ + +  VSF S ++Y
Sbjct: 61  ILYNIILQVLFVSFVSYWLY 80


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 198 FHFNKYCIFPFTVRLSRTFSTT 133
           FHFNKY   P  + ++ +   T
Sbjct: 154 FHFNKYLCRPRRIEIAASLDLT 175


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 198 FHFNKYCIFPFTVRLSRTFSTTNSS 124
           FHFN+Y      + ++     TN +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTNKN 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,999
Number of Sequences: 336
Number of extensions: 1512
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)