Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H19
(398 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39782| Best HMM Match : Chromo_shadow (HMM E-Value=1.4e-23) 76 9e-15
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27) 62 2e-10
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 51 3e-07
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10) 42 2e-04
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_21158| Best HMM Match : Chromo (HMM E-Value=0.00035) 33 0.11
SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09) 32 0.15
SB_621| Best HMM Match : SNF2_N (HMM E-Value=0) 32 0.20
SB_18195| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_14928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.80
SB_10723| Best HMM Match : Chromo (HMM E-Value=0.031) 29 1.4
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 28 2.4
SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16) 28 2.4
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_32982| Best HMM Match : Fer4 (HMM E-Value=7.8) 27 4.3
SB_56881| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_11917| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_10130| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_41506| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_36872| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_36265| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_10336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_8616| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_52017| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_44480| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_39261| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_31563| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_31299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_28361| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 7.4
SB_26642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_25143| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_18319| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_12886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 26 9.8
SB_38526| Best HMM Match : Gaa1 (HMM E-Value=0.51) 26 9.8
SB_19966| Best HMM Match : PPI_Ypi1 (HMM E-Value=5.5) 26 9.8
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 26 9.8
SB_1782| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_54065| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_46427| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_39383| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_34134| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_27681| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_19827| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 26 9.8
SB_4756| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_3509| Best HMM Match : XAP5 (HMM E-Value=7.6) 26 9.8
>SB_39782| Best HMM Match : Chromo_shadow (HMM E-Value=1.4e-23)
Length = 226
Score = 76.2 bits (179), Expect = 9e-15
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +2
Query: 89 DKKTE-TSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIK 265
D+ TE G EEE+ VEKV+DKR + G I+YLLKWKGY + E+TWE E L C ELI+
Sbjct: 13 DETTEPVPTGEVEEEYEVEKVMDKRVINGGIEYLLKWKGYPDSENTWESEEGLQCPELIE 72
Query: 266 AF 271
+
Sbjct: 73 EY 74
>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
Length = 1373
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 137 VEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL-DCEELIKAFXXXXXXXXXXXXXX 313
VEK+LD+R +GK++YL++WKGY + TWEP +NL C+ELI F
Sbjct: 907 VEKILDRRVQRGKVEYLVRWKGYGPADDTWEPSKNLKGCKELIDNFLNSATSTKSRRRSG 966
Query: 314 XXGKKRVRELSEETSTGRQGRATSV 388
K V E ++ R+ R T V
Sbjct: 967 IIKAKPVEEFTKLKLPSRR-RETKV 990
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 51.2 bits (117), Expect = 3e-07
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 131 FVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIKAF 271
+ E +L +R GK+ Y +KWKGY + +TWEP EN+ L+KA+
Sbjct: 25 YAAETILKERVRDGKVWYFIKWKGYSQRYNTWEPEENVLDPRLLKAY 71
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +2
Query: 137 VEKVLDKR-TVKGKIQYLLKWKGYKEDESTWEPVENL 244
+ +++ +R T GK +YL+ WK YK ESTWEP+ENL
Sbjct: 24 INEIIGRRITQSGKEEYLVHWKKYKVWESTWEPLENL 60
>SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10)
Length = 517
Score = 41.5 bits (93), Expect = 2e-04
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +2
Query: 182 YLLKWKGYKEDESTWEPVENL-DCEELIKAF 271
+ ++WKGY D+ TWEP EN+ +CE++++ F
Sbjct: 19 FKVRWKGYTPDDDTWEPEENVFECEDVLEEF 49
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 32.7 bits (71), Expect = 0.11
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 74 EMGKKDKKTETSDGSSEEE---FVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL 244
E K T T+ S + F+V+K+L+ R +YL+ W +D TWEP N+
Sbjct: 948 ENKSKSSLTPTATEQSTDNDGIFIVKKLLNCRRRSKTTEYLVLW---SDDSQTWEPRHNI 1004
Query: 245 DCEELI 262
+ LI
Sbjct: 1005 LDKRLI 1010
>SB_21158| Best HMM Match : Chromo (HMM E-Value=0.00035)
Length = 132
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 116 SSEEEFVVEKVLDKRTVK--GKIQYLLKWKGYKEDESTWEPVENLDCEELIKAF 271
S + + VE+++ +R G +YL+KWK + ST EP +L E LI+++
Sbjct: 36 SGSKVYDVERIISQRITSRNGDKEYLVKWKNWPIWTSTLEPANHL-TEALIRSY 88
>SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09)
Length = 590
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 131 FVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELI 262
F+V+K+L+ R +YL+ W +D TWEP N+ + LI
Sbjct: 401 FIVKKLLNCRRRSKTTEYLVLW---SDDSQTWEPRHNILDKRLI 441
>SB_621| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1432
Score = 31.9 bits (69), Expect = 0.20
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Frame = +2
Query: 101 ETSDGSSEEEFVVEKVLDKRTVKG---------KIQYLLKWKGYKEDESTWE 229
E ++ EE VE+++ TVK +I YL KW+G ESTWE
Sbjct: 18 EMNNNLIEEYKEVERIISHTTVKNLDEFGNTVNQIDYLCKWQGLPYGESTWE 69
>SB_18195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 30.7 bits (66), Expect = 0.46
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 179 QYLLKWKGYKEDESTWEPVENLDCEEL 259
QYL+KWK + +WEPV +L + L
Sbjct: 156 QYLIKWKDWPLQFCSWEPVTHLTADLL 182
>SB_14928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.9 bits (64), Expect = 0.80
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+RK KK+ +W +T + + GN
Sbjct: 6 KHKERKRKKKKSPLAWDRTRSEEQNGN 32
>SB_10723| Best HMM Match : Chromo (HMM E-Value=0.031)
Length = 191
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 146 VLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCE 253
VL+++T +GK G+ ++TWEPVEN+ E
Sbjct: 43 VLERKTTEGK--------GFSPYDATWEPVENMTSE 70
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 125 EEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEP 232
+ F ++ V+ R G+ Y + WKG+ + +W P
Sbjct: 1074 QHFKIDSVVKTRKRGGRKVYWVHWKGWPDKYKSWVP 1109
>SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16)
Length = 1456
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +2
Query: 131 FVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLD 247
F +++VL G+ +Y + WKG+ + ++W P ++
Sbjct: 1227 FKIDRVLKTWKRGGRGEYWVHWKGWPDKYNSWVPATEVN 1265
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 149 LDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIKAF 271
+D T + +L+KW+ +ESTWE +++ E I+ F
Sbjct: 501 MDHNTGEPITHFLVKWRSLPYEESTWEVKADVE-ESKIQQF 540
>SB_32982| Best HMM Match : Fer4 (HMM E-Value=7.8)
Length = 192
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 83 KKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLK 193
+KD + E G ++F EK L + KG++Q L K
Sbjct: 122 RKDHEFEEEGGQESKDFSKEKCLRLKAGKGEVQELRK 158
>SB_56881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRTKKKSPLAWDRTRSEEQNGN 32
>SB_11917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRTKKKSPLAWDRTRSEEQNGN 32
>SB_10130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRTKKKSPLAWDRTRSEEQNGN 32
>SB_41506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_36872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_36265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_10336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_8616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEKQNGN 32
>SB_52017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_44480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_39261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_31563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_31299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_28361| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 551
Score = 26.6 bits (56), Expect = 7.4
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3
Query: 189 NKYCIFPFTVRLSRTFSTTNSSSLDPSLVSVFLSFLPIS 73
N I P+T+ ++ + S+++SSS PSL S FLP++
Sbjct: 327 NTKVISPYTI-INNSKSSSSSSSSSPSLSSSPSLFLPLA 364
>SB_26642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_25143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_18319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_12886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 242 DSLLAPKCSHLLYNLSISINIVSFPSQYVYRELFQQQTLLH 120
DSL PKC + L LS ++ + SF Q V + + + H
Sbjct: 830 DSLSPPKCGNKLAALSCTVVVGSFAYQLVLLNIDRYLAMKH 870
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 26 VLQRRCFTVYHINYYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGK 175
V + VY+ L G + D +++EF + K++DKR ++GK
Sbjct: 438 VTDKEVTDVYNFGQKLGDGNFAIVRQCKDKITQKEFAI-KIIDKRKIRGK 486
>SB_38526| Best HMM Match : Gaa1 (HMM E-Value=0.51)
Length = 189
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 74 EMGKKDKKTETSDGSSEEEFVVEKVLDKR 160
E G +DK + DGS + E V E VL ++
Sbjct: 148 ECGAEDKAVKDVDGSKQSEHVDESVLRQK 176
>SB_19966| Best HMM Match : PPI_Ypi1 (HMM E-Value=5.5)
Length = 214
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+E++R KK++ +W +T + + GN
Sbjct: 6 QHKEKKRIKKKSQLAWDRTRSEEQNGN 32
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 104 TSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDE 217
TSDG SE+E + ++D + +Q + K K +E E
Sbjct: 1275 TSDGDSEDEDTADGLVDMEDLGPAVQKIKKAKKQREIE 1312
>SB_1782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 KHKERKRIKKKSPLAWDRTRSEDQNGN 32
>SB_54065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+E++R KK+ +W +T + + GN
Sbjct: 6 KHKEKKRTKKKSPLAWDRTRSEEQNGN 32
>SB_46427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_39383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+R +W +T + E GN
Sbjct: 10 KHKERKRI-KKSRLAWDRTRSEEENGN 35
>SB_34134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_27681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+E++R KK+ +W +T + + GN
Sbjct: 6 KHKEKKRTKKKSPLAWDRTRSEEQNGN 32
>SB_19827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQKTCARVE*GN 354
+H+ER+R KK+ +W +T + + GN
Sbjct: 6 QHKERKRIKKKSPLAWDRTRSEEQNGN 32
>SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11)
Length = 672
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +2
Query: 119 SEEEFVVEKVLDKRTVKGKIQYLLKWKGYKE 211
++E+ + + + KR V+ K+Q++L +GY+E
Sbjct: 119 AKEQEIQDLLTAKRAVESKLQHVLTAQGYEE 149
>SB_4756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 116 SSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKED 214
+ ++ F +KV+ +R K K Q L+KWKGY ++
Sbjct: 74 AKQDVFRFDKVI-RRDYKKK-QALVKWKGYSDE 104
>SB_3509| Best HMM Match : XAP5 (HMM E-Value=7.6)
Length = 250
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 83 KKDKKTETSDGSSEEE-FVVEKVLDKRTVKGKIQYLLKWKGYKEDE 217
K++K+TE SD EEE F V+ D + ++++L + K E E
Sbjct: 16 KEEKRTEMSDDEGEEETFHVKFSSDSNSRSKRLRFLPRRKRDNEME 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,237,430
Number of Sequences: 59808
Number of extensions: 164045
Number of successful extensions: 829
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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