Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H19
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   0.44 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   2.4  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   5.4  
AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    23   5.4  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   5.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   9.5  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 29  LQRRCFTVYHINYYLE-MGKKDKKTETSDGSSEEEFVVEKVL 151
           L R  FTV H +++LE    ++++ +T +  +   +V E++L
Sbjct: 23  LHRIAFTVLHASFFLENKNGREEEQQTINKYNSLNYVTERIL 64


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 254 LHNQDSLLAPKCSHLLYNLSISINIVSFPSQYVYRELFQQQTLLHLIHRWF 102
           LH+  S ++PK    +   S S N++SF +  ++R  F+  T L  I+  F
Sbjct: 568 LHSCSSAISPKQHGFMPGRSTSTNLMSFVTN-IFRS-FEAGTQLDAIYTDF 616


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 229 LPSALIFFITFPFQ*ILYLSLHSTFIEN 146
           LP+ L+++IT P   +L L ++S F  N
Sbjct: 688 LPAGLVYYITIPSMYML-LVIYSVFNMN 714


>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 198 FHFNKYCIFPFTVRLSRTFSTT 133
           FHFNKY   P  + ++ +   T
Sbjct: 43  FHFNKYLCRPRRIEIAASLDLT 64


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 326 KRVRELSEETSTG 364
           K +R LSEET+TG
Sbjct: 148 KEIRGLSEETTTG 160


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +2

Query: 110 DGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPV 235
           +G +EE  + E++   RT+  K+Q     KG +E+++  + V
Sbjct: 776 EGETEETTLREELEHSRTILAKLQ-----KGIEEEQAKLDQV 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,447
Number of Sequences: 2352
Number of extensions: 6029
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)