Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H19
(398 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 49 2e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 3.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 5.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.9
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 20 9.1
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 49.2 bits (112), Expect = 2e-08
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 116 SSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL-DCEELIKAF 271
S + + VE++L K+ +KG YL+KWK + +TWEP+ NL +C ++++ F
Sbjct: 239 SETDIWEVEQILAKKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEF 291
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 392 MRHW*LALVFLYWFP 348
M W + +VFLYW P
Sbjct: 328 MSEW-VKVVFLYWLP 341
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 174 FPFTVRLSRTFSTTNSSSLDPSLVSVFLSFLPIS 73
FPF + S ++SS LV +++++P S
Sbjct: 304 FPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPS 337
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 274 RHQERERKNKKTRRSWQK 327
R +ERE+ + K R +QK
Sbjct: 41 RSREREQNSYKNEREYQK 58
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 174 FPFTVRLSRTFSTTNSSSLDPSLVSVFLSFLPIS 73
FPF + S ++SS L+ +++++P S
Sbjct: 304 FPFNFAFIKNVSRDSNSSDFKKLIDNWMTYMPPS 337
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 128 EFVVEKVLDKRT 163
EFVV KVLD R+
Sbjct: 279 EFVVVKVLDLRS 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,939
Number of Sequences: 438
Number of extensions: 1683
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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