Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H18
(415 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 1.8
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 1.8
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 1.8
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 27 5.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 5.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 5.4
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 27 5.4
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 27 5.4
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 26 9.4
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 26 9.4
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 215 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 108
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 965 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 1000
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 215 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 108
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 961 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 996
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 215 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 108
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 961 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 996
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 216 PQSLCIFQNLLLEAHIHVIVDTVLNNAQNAATDSKICRFLFGGHRAHRRD 67
P+ + N ++ V++D V N+ +SK FL HR HR D
Sbjct: 3292 PEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFRPFLSYRHRLHRPD 3341
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 216 PQSLCIFQNLLLEAHIHVIVDTVLNNAQNAATDSKICRFLFGGHRAHRRD 67
P+ + N ++ V++D V N+ +SK FL HR HR D
Sbjct: 3292 PEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFRPFLSYRHRLHRPD 3341
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 296 GSKARADIGEPLLSKVTPSIKVISLFDLKVSAYFKTFSL 180
GS A +IG LLS P + S L VS+ F++ SL
Sbjct: 477 GSTATVEIGSGLLSAFKPILSASSSNLLSVSSPFQSLSL 515
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 5.4
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +1
Query: 94 EQESTD--LGIGGSVLGIVKDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKG 267
+Q+ TD L + + K D+ + +EK+ K +E +++E L D + LES+
Sbjct: 13209 KQKETDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEI 13268
Query: 268 SPMSARALE-PLSDEPKARE-AQVES 339
+ A A + L ++ +A++ A+VE+
Sbjct: 13269 ATKKASADKLKLEEQAQAKKAAEVEA 13294
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 5.4
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +1
Query: 94 EQESTD--LGIGGSVLGIVKDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKG 267
+Q+ TD L + + K D+ + +EK+ K +E +++E L D + LES+
Sbjct: 13209 KQKETDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEI 13268
Query: 268 SPMSARALE-PLSDEPKARE-AQVES 339
+ A A + L ++ +A++ A+VE+
Sbjct: 13269 ATKKASADKLKLEEQAQAKKAAEVEA 13294
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 253 LESKGSPMSARALEPLSDEPKAREAQVESRLVDSAADFLENYVIQFKMPSSAV 411
+ESK S ++R + ++ A +A + + + D+A + EN+ + K+ SS +
Sbjct: 35 IESKMSAQASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGI 87
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 150 VLNNAQNAATDSKICRFLFGGHRAHRRD*K 61
V+ ++ ++ D ++ +F+ G HR H D K
Sbjct: 637 VIRDSVDSVEDERLAKFVVGNHRTHHPDAK 666
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 84 DAHRTGIYRSWNRWQRF 134
DAHRTG+ R WN + F
Sbjct: 520 DAHRTGVSRWWNSIKAF 536
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 89 PPNRNLQILESVAAFWALLRTVSTMTCICA 178
PP+ L S AF AL +ST+ C+C+
Sbjct: 870 PPSSRLANCLSSVAFPALQAALSTILCVCS 899
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 89 PPNRNLQILESVAAFWALLRTVSTMTCICA 178
PP+ L S AF AL +ST+ C+C+
Sbjct: 870 PPSSRLANCLSSVAFPALQAALSTILCVCS 899
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 368 KKSAAESTNLDST---CASLAFGSSDSGSKARADIGEPLLSKVTP 243
KK AA+ T ++T A A SSDS + + +P +K TP
Sbjct: 504 KKPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVAKPTSAKATP 548
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,707,155
Number of Sequences: 27780
Number of extensions: 193827
Number of successful extensions: 557
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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