Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H17
(504 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86NN8 Cluster: RH49324p; n=16; Arthropoda|Rep: RH49324... 153 2e-36
UniRef50_A6N9T0 Cluster: Cytochrome c oxidase polyprotein Vb; n=... 128 9e-29
UniRef50_UPI0000584579 Cluster: PREDICTED: similar to cytochrome... 121 1e-26
UniRef50_P90849 Cluster: Putative uncharacterized protein cco-1;... 100 2e-20
UniRef50_P10606 Cluster: Cytochrome c oxidase subunit 5B, mitoch... 99 3e-20
UniRef50_A7SG22 Cluster: Predicted protein; n=1; Nematostella ve... 97 2e-19
UniRef50_Q9VMB8 Cluster: CG11043-PA; n=6; Sophophora|Rep: CG1104... 87 3e-16
UniRef50_Q5DB28 Cluster: SJCHGC01711 protein; n=2; Schistosoma j... 71 1e-11
UniRef50_P79010 Cluster: Cytochrome c oxidase polypeptide IV, mi... 60 2e-08
UniRef50_P92683 Cluster: Cytochrome c oxidase subunit Vb; n=7; M... 57 2e-07
UniRef50_P06809 Cluster: Cytochrome c oxidase polypeptide IV, mi... 56 5e-07
UniRef50_Q1EMP4 Cluster: Cytochrome c oxidase subunit 5b; n=1; P... 53 3e-06
UniRef50_Q2UEE5 Cluster: Cytochrome c oxidase; n=1; Aspergillus ... 53 4e-06
UniRef50_A7P5P3 Cluster: Chromosome chr4 scaffold_6, whole genom... 51 1e-05
UniRef50_Q5DFC5 Cluster: SJCHGC06267 protein; n=1; Schistosoma j... 50 4e-05
UniRef50_Q9LW15 Cluster: Cytochrome c oxidase subunit Vb-like pr... 47 2e-04
UniRef50_A5DU86 Cluster: Cytochrome c oxidase polypeptide IV, mi... 47 2e-04
UniRef50_Q01GC2 Cluster: Cytochrome c oxidase, subunit Vb/COX4; ... 44 0.003
UniRef50_Q5K8Q1 Cluster: Cytochrome c oxidase polypeptide iv, mi... 42 0.010
UniRef50_A5B9Z5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.17
UniRef50_P29505 Cluster: Cytochrome c oxidase polypeptide 5; n=2... 34 1.6
UniRef50_UPI0000E49713 Cluster: PREDICTED: similar to scavenger ... 33 3.7
UniRef50_Q0U790 Cluster: Putative uncharacterized protein; n=1; ... 32 6.4
UniRef50_Q92259 Cluster: GATA factor SREP; n=8; Trichocomaceae|R... 32 8.5
>UniRef50_Q86NN8 Cluster: RH49324p; n=16; Arthropoda|Rep: RH49324p -
Drosophila melanogaster (Fruit fly)
Length = 154
Score = 153 bits (371), Expect = 2e-36
Identities = 64/94 (68%), Positives = 77/94 (81%)
Frame = +3
Query: 99 KMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIVGCIC 278
KMM DPLEHATG+E+REL+ AGND+PF+MKV K+ AGT+E+P L+PS FDARIVGCIC
Sbjct: 61 KMMNDPLEHATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFDARIVGCIC 120
Query: 279 EEHATAVTWLWLHKDHPRRCECGHWYKLVEKQFV 380
EE T V W+WL K + +RCECGHW+KLVEK V
Sbjct: 121 EEDQTYVQWMWLQKGNQKRCECGHWFKLVEKAAV 154
>UniRef50_A6N9T0 Cluster: Cytochrome c oxidase polyprotein Vb; n=4;
Arthropoda|Rep: Cytochrome c oxidase polyprotein Vb -
Ornithodoros parkeri
Length = 122
Score = 128 bits (308), Expect = 9e-29
Identities = 53/104 (50%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = +3
Query: 60 KCLLPIARRGYAD-KMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTL 236
+ L+ ARR ++ K + D E+A G E+ EL A+ AGN+DPF+M+V K+ GT+++P L
Sbjct: 15 RALIINARRYKSEEKRIFDAREYACGKEKLELDAIAAGNEDPFDMRVFKRGPGTKDNPNL 74
Query: 237 VPSCFDARIVGCICEEHATAVTWLWLHKDHPRRCECGHWYKLVE 368
+PS + R++GCICEE AT + W+WLH+ PRRCECGHW+KLV+
Sbjct: 75 IPSYLEKRMIGCICEEDATVINWMWLHRGDPRRCECGHWFKLVD 118
>UniRef50_UPI0000584579 Cluster: PREDICTED: similar to cytochrome c
oxidase, subunit VB, putative; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase, subunit VB, putative - Strongylocentrotus
purpuratus
Length = 128
Score = 121 bits (291), Expect = 1e-26
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = +3
Query: 60 KCLLPIARRGYA-DKMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTL 236
+CL + R A +PD EHATGLE++EL ++AG+ DPF + V + AAGT+ P
Sbjct: 16 RCLYSQSSRAMAAGGGIPDNFEHATGLEKKELDRIKAGDSDPFQLNVRRVAAGTKTKPVE 75
Query: 237 VPSCFDARIVGCICEEHATAVTWLWLHKDHPRRCECGHWYKLVE 368
V S F RIVGCICEE T + W+WL+ P+RCECGHW+KL E
Sbjct: 76 VTSAFQKRIVGCICEEEQTHINWMWLYTGEPQRCECGHWFKLQE 119
>UniRef50_P90849 Cluster: Putative uncharacterized protein cco-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cco-1 - Caenorhabditis elegans
Length = 132
Score = 100 bits (240), Expect = 2e-20
Identities = 45/88 (51%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 108 PDPLEHATGLERRELMAMQAGNDDPFNMKVLKKA-AGTRESPTLVPSCFDARIVGCICEE 284
PDPLEHATG E++ L+A AG DD + KV +A A T++ P LVPS +D RI+GC+CE+
Sbjct: 40 PDPLEHATGREKKMLLARLAG-DDRYEPKVYYRAEASTKQKPNLVPSHYDFRIIGCMCEQ 98
Query: 285 HATAVTWLWLHKDHPRRCECGHWYKLVE 368
+ V ++ + K P+RCECGHW+K V+
Sbjct: 99 DSGHVNFMTIRKGDPKRCECGHWFKGVD 126
>UniRef50_P10606 Cluster: Cytochrome c oxidase subunit 5B,
mitochondrial precursor; n=38; Euteleostomi|Rep:
Cytochrome c oxidase subunit 5B, mitochondrial precursor
- Homo sapiens (Human)
Length = 129
Score = 99 bits (238), Expect = 3e-20
Identities = 49/91 (53%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 105 MPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIVGCICEE 284
+P E ATGLER ++A + G D P+N+ K A+GTRE P LVPS + RIVGCICEE
Sbjct: 37 VPTDEEQATGLEREIMLAAKKGLD-PYNVLAPKGASGTREDPNLVPSISNKRIVGCICEE 95
Query: 285 HATAVTWLWLHKDHPRRC-ECGHWYKLVEKQ 374
T+V W WLHK +RC CG YKLV +Q
Sbjct: 96 DNTSVVWFWLHKGEAQRCPRCGAHYKLVPQQ 126
>UniRef50_A7SG22 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 91
Score = 97.5 bits (232), Expect = 2e-19
Identities = 39/81 (48%), Positives = 59/81 (72%)
Frame = +3
Query: 120 EHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIVGCICEEHATAV 299
E ATGLE+ E A+ AG +DPF +K+ GT+++PT+VPS ++ RIVGC+CEE AT +
Sbjct: 1 EQATGLEKAEYDALVAGYEDPFRLKMANGPPGTKDNPTIVPSGYEERIVGCVCEEDATMI 60
Query: 300 TWLWLHKDHPRRCECGHWYKL 362
W+ L P+RC+CG++++L
Sbjct: 61 RWMLLKAGPPQRCDCGNYFQL 81
>UniRef50_Q9VMB8 Cluster: CG11043-PA; n=6; Sophophora|Rep:
CG11043-PA - Drosophila melanogaster (Fruit fly)
Length = 154
Score = 86.6 bits (205), Expect = 3e-16
Identities = 35/80 (43%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Frame = +3
Query: 129 TGLERRELMAMQAGNDDPFNM-KVLKKAAGTRESPTLVPSCFDARIVGCICEEHATAVTW 305
TG+++RE++ + G +DP+ KV+++ +G PT+VPS FDAR+VGC+C + W
Sbjct: 70 TGIQKREMLLAKQGCEDPWGFSKVIRRGSGRENDPTVVPSAFDARLVGCLCLDDRLP-KW 128
Query: 306 LWLHKDH-PRRCECGHWYKL 362
+W+ KD P+RCECGH++ L
Sbjct: 129 MWIEKDEGPKRCECGHYFIL 148
>UniRef50_Q5DB28 Cluster: SJCHGC01711 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01711 protein - Schistosoma
japonicum (Blood fluke)
Length = 143
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 117 LEHATGLERRELMAMQAGNDDPFNMKVLK-KAAGTRESPTLVPSCFDARIVGCICEEHAT 293
L A + EL++ DPF ++ ++ +R+SP L+PS R+VGCICE A
Sbjct: 49 LTEAVNTKNFELVSKIVTEQDPFEVRRIRIPTNNSRKSPNLIPSQSGRRMVGCICEPEAD 108
Query: 294 AVTWLWLHKDHPRRCECGHWYKLVE 368
++ WL L K P +C CG+W+++V+
Sbjct: 109 SINWLELEKGDPVQCYCGYWFQIVD 133
>UniRef50_P79010 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 164
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +3
Query: 87 GYADKMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKA-AGTRESPTLVPSCFDARI 263
G D +P LE ATGLER EL++ +G D F+MK L + GT P +V S R
Sbjct: 59 GGRDGEVPTDLEQATGLERYELLSELSGR-DAFDMKPLDASRKGTLTDPIMVTSLDPYRH 117
Query: 264 VGCICEEHAT-AVTWLWLHKDHPRRC-ECGHWYKL 362
+GC + + W+ ++KD RRC ECG YKL
Sbjct: 118 IGCTGSPSGSHNLIWMTVYKDKLRRCPECGSVYKL 152
>UniRef50_P92683 Cluster: Cytochrome c oxidase subunit Vb; n=7;
Magnoliophyta|Rep: Cytochrome c oxidase subunit Vb -
Oryza sativa subsp. japonica (Rice)
Length = 169
Score = 57.2 bits (132), Expect = 2e-07
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 111 DPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIVGCICEEHA 290
D + ATGLER EL A G + F+M GT+E+P ++ S ++ RIVGC E
Sbjct: 64 DVMPIATGLEREELAAELKG-EKRFDMDPPVGPFGTKEAPAVIESYYNKRIVGCPGGEGE 122
Query: 291 TA--VTWLWLHKDHPRRCE-CGHWYKL 362
V W WL KD P C C ++ L
Sbjct: 123 DEHDVVWFWLKKDEPHECPVCSQYFVL 149
>UniRef50_P06809 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial precursor; n=16; Pezizomycotina|Rep:
Cytochrome c oxidase polypeptide IV, mitochondrial
precursor - Neurospora crassa
Length = 186
Score = 56.0 bits (129), Expect = 5e-07
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 87 GYADKMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKA-AGTRESPTLVPSCFDARI 263
G A +P LE ATGLER E++ G D F+MK L + GT E+P V S D +
Sbjct: 57 GAAPGTVPTDLEQATGLERLEILGKMEG-VDVFDMKPLDASRRGTMENPISVRSAGDEQY 115
Query: 264 VGCI-CEEHATAVTWLWLHKDHP-RRC-ECGHWYKL 362
GC + V WL + ++ P RC ECG+ YK+
Sbjct: 116 AGCTGFPADSHNVIWLTMTRERPVERCPECGNVYKM 151
>UniRef50_Q1EMP4 Cluster: Cytochrome c oxidase subunit 5b; n=1;
Plantago major|Rep: Cytochrome c oxidase subunit 5b -
Plantago major (Common plantain)
Length = 162
Score = 53.2 bits (122), Expect = 3e-06
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +3
Query: 87 GYADKMMPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIV 266
G K D + TG ER EL A G D + + GT+E P +V S +D RIV
Sbjct: 50 GNVAKRPEDVIPIVTGHEREELQAELQGKDI-LEINYPEGPFGTKEEPAVVKSYYDKRIV 108
Query: 267 GC--ICEEHATAVTWLWLHKDHPRRCE-CGHWYKL 362
GC E V W WL K P C C ++ L
Sbjct: 109 GCPGADGEDEHDVVWFWLEKGKPHECPVCSQYFVL 143
>UniRef50_Q2UEE5 Cluster: Cytochrome c oxidase; n=1; Aspergillus
oryzae|Rep: Cytochrome c oxidase - Aspergillus oryzae
Length = 208
Score = 52.8 bits (121), Expect = 4e-06
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +3
Query: 105 MPDPLEHATGLERRELMAMQAGNDDPFNMKVLKKA-AGTRESPTLVPSCFDARIVGCI-C 278
+P +E ATGLER EL+ G D F+M+ L + GT E+P +V D + GC
Sbjct: 66 VPSDIEQATGLERLELVGKMQG-IDIFDMRPLDASRKGTLENPIIVNGAGDEQYAGCTGF 124
Query: 279 EEHATAVTWLWLHKDHP-RRC-ECGHWYKL 362
+ V WL + +D P RC ECG+ KL
Sbjct: 125 PADSHTVNWLTVSRDRPIERCGECGNVVKL 154
>UniRef50_A7P5P3 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 194
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 213 GTRESPTLVPSCFDARIVGCICEEHATA--VTWLWLHKDHPRRCE-CGHWYKL 362
GT+E+P +V S +D RIVGC E V W WLHKD P C C +KL
Sbjct: 130 GTKEAPAIVKSFYDRRIVGCPGGEGEDEHDVVWFWLHKDQPHVCPVCSQHFKL 182
>UniRef50_Q5DFC5 Cluster: SJCHGC06267 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06267 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 216 TRESPTLVPSCFDARIVG-CICEEHATAVTWLWLHKDHPRRCECGHWYKLVEKQ 374
++E P LV SC D R V C C H V +L L+++ P RC CG+W+ LV++Q
Sbjct: 89 SKEDPNLV-SCSDIRSVQMCHCSPHDRYVNYLVLYRNLPTRCFCGNWFLLVDEQ 141
>UniRef50_Q9LW15 Cluster: Cytochrome c oxidase subunit Vb-like
protein; n=9; core eudicotyledons|Rep: Cytochrome c
oxidase subunit Vb-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 176
Score = 47.2 bits (107), Expect = 2e-04
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +3
Query: 93 ADKMMPDPLEHATGLERRELMAMQAGN--DDPFNMKVLKKAAGTRESPTLVPSCFDARIV 266
A K + D + ATG E+ EL A G DD + + GT+E+P +V S +D RIV
Sbjct: 64 ATKKVEDVMPIATGHEKEELEAELEGRRLDD---IDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 267 GCICEEHATA--VTWLWLHKDHPRRCE-CGHWYKL 362
GC E V W WL K C C +++L
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFEL 155
>UniRef50_A5DU86 Cluster: Cytochrome c oxidase polypeptide IV,
mitochondrial; n=5; Saccharomycetales|Rep: Cytochrome c
oxidase polypeptide IV, mitochondrial - Lodderomyces
elongisporus (Yeast) (Saccharomyces elongisporus)
Length = 158
Score = 47.2 bits (107), Expect = 2e-04
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +3
Query: 105 MPDPLEHATGLERRELMAMQAGNDDPFNMKV-LKKAAGTRESPTLVPSCFDARIVGCI-C 278
+P + ATGL+R EL+ + G D F+M++ + + GT E P LVP+ R VGC
Sbjct: 61 IPTDFDQATGLQRLELLGKKEGVD-VFDMEMPITEGKGTMEDPFLVPTYIGYRYVGCKGT 119
Query: 279 EEHATAVTWLWLHKDHPRRC-ECG 347
E W+ + + H RC CG
Sbjct: 120 AEVDHKPYWMKVEEGHVSRCWRCG 143
>UniRef50_Q01GC2 Cluster: Cytochrome c oxidase, subunit Vb/COX4;
n=2; Ostreococcus|Rep: Cytochrome c oxidase, subunit
Vb/COX4 - Ostreococcus tauri
Length = 202
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = +3
Query: 117 LEHATGLERRELMAMQAGNDDPFNMKVLKKAAGTRESPTLVPSCFDARIVGCICEEHATA 296
LE+ATGL + EL G D + L+ GT ESP +V S + R+VG + +
Sbjct: 33 LENATGLYKEELEGKLRGEDIFDHHAFLRAPQGTEESPCVVESTMEYRVVGSPDPDDDSI 92
Query: 297 VTWLWLHKDHPRRCECGHWY 356
+ W L + P R W+
Sbjct: 93 IHWGRLEEGAPPRNIGSEWF 112
>UniRef50_Q5K8Q1 Cluster: Cytochrome c oxidase polypeptide iv,
mitochondrial, putative; n=3; Basidiomycota|Rep:
Cytochrome c oxidase polypeptide iv, mitochondrial,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 212
Score = 41.5 bits (93), Expect = 0.010
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Frame = +3
Query: 105 MPDPLEHATGLERRELMAMQAGNDDPFNMKVLK-KAAGTRESPTLVPSCFDARIVGCI-- 275
+P+ +TGLER EL+ G D F+MK L+ GT + P + S F R +GC
Sbjct: 108 VPNDENQSTGLERFELLGNLEG-VDVFDMKPLEITRLGTVDEPIPIYSLFPERQIGCTGF 166
Query: 276 -CEEHATAVTWLWLHKDHP---RRC-ECGHWYKL 362
+ H T +WL+ +H RC ECG Y L
Sbjct: 167 PVDSHDT----IWLNVNHTLKNHRCPECGSVYTL 196
>UniRef50_A5B9Z5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 110
Score = 37.5 bits (83), Expect = 0.17
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 219 RESPTLVPSCFDARIVGCICEEHATA--VTWLWLHKDHPRRCE-CGHWYKL 362
RE+P +V S +D RIVGC E V W WL K C C ++ +
Sbjct: 17 REAPAVVQSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKSHECPVCSQYFTM 67
>UniRef50_P29505 Cluster: Cytochrome c oxidase polypeptide 5; n=2;
Dictyostelium discoideum|Rep: Cytochrome c oxidase
polypeptide 5 - Dictyostelium discoideum (Slime mold)
Length = 120
Score = 34.3 bits (75), Expect = 1.6
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 177 DPFNMKVLKKAAGTRESPTLVPSCFDARIVGC---ICEEHATAVTWLWLHKDHPRRC-EC 344
+ F +VL A GT +SP +V S F +RIV C EEH + + + + P C +C
Sbjct: 45 EDFGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDGEEH--DILFHTVAEKKPTICLDC 102
Query: 345 GHWYKL 362
G +KL
Sbjct: 103 GQVFKL 108
>UniRef50_UPI0000E49713 Cluster: PREDICTED: similar to scavenger
receptor cysteine-rich protein precursor, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
scavenger receptor cysteine-rich protein precursor,
partial - Strongylocentrotus purpuratus
Length = 593
Score = 33.1 bits (72), Expect = 3.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 397 KLLCIYTNCFST--NLYQCPHSQRRGWSLCNQSQVTAVACSSHMHP 266
++L Y NC T NL C H + R ++ C V C S HP
Sbjct: 211 RILLTYVNCGGTEDNLADCAHQEIRDYNYCAYRGNAGVICYSGAHP 256
>UniRef50_Q0U790 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 913
Score = 32.3 bits (70), Expect = 6.4
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = -3
Query: 355 YQCPHSQRRGWSLCNQSQVTAVACSSHMHPTIRASKQDGTRVGLS 221
Y C H W +C +V C H ++ ++ DG V ++
Sbjct: 857 YHCRHCSDGDWDVCEDCKVRGAFCPEETHVLVKRTRMDGKWVEMT 901
>UniRef50_Q92259 Cluster: GATA factor SREP; n=8; Trichocomaceae|Rep:
GATA factor SREP - Penicillium chrysogenum (Penicillium
notatum)
Length = 532
Score = 31.9 bits (69), Expect = 8.5
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 210 AGTRESPTLVPSCFDARIVGCICEEHATAVTWLWLHKD--HPRRCECGHWYKL 362
A E+P P+ DA C+ T VT LW + HP CG +YKL
Sbjct: 216 ATQEETPVKAPAPADASNTLVACQNCGTTVTPLWRRDEQGHPICNACGLYYKL 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,879,187
Number of Sequences: 1657284
Number of extensions: 11477852
Number of successful extensions: 27190
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27177
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -