Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H16
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 85 2e-17
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.31
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 31 0.31
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 30 0.95
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 30 0.95
U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 28 3.8
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 3.8
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 3.8
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 3.8
Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 8.9
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 27 8.9
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 85.0 bits (201), Expect = 2e-17
Identities = 39/55 (70%), Positives = 48/55 (87%)
Frame = +2
Query: 305 MEWLFGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQ 469
M++LFG R TP E+LR+NQRALNKA+R+LDRER +ME QEKKVIADIK +AK+ Q
Sbjct: 1 MDFLFGRRKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQ 55
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +2
Query: 314 LFGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 466
LFG + P E +R+ QR + + MR LDR+ ++++E+KV +IK+ AK+G
Sbjct: 3 LFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKG 53
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 335 PDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEG 466
P E+ R N+R L K RDL+ +R +M+++EK++ +IKKLA +G
Sbjct: 9 PKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKG 52
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.31
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 329 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.31
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 329 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
+TP+ + + +NKA DL ++++ EQ+ KV+A+
Sbjct: 53 LTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAE 90
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 29.9 bits (64), Expect = 0.95
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 329 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 29.9 bits (64), Expect = 0.95
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 329 MTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
+TP+ + + + KA DL R+++ EQ+ +K +AD
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKALAD 78
>U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical
protein T21E12.2 protein.
Length = 380
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 397 PVEISHSFIESSLVLAEHLIRCHTMPK*PLHHYFFYRY*MLNTN 266
P+E H+ IE +L H+M L+H+FF +L TN
Sbjct: 310 PIESVHNKIEKNLATTTTTFLLHSMLLLFLYHFFFLLALLLQTN 353
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = +2
Query: 341 EMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 463
EML++ +++L + + E +MEQ++KK++ +++ L K+
Sbjct: 177 EMLKEQRKSLGERVE----EEKRMEQEQKKMLEELEMLLKK 213
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 338 DEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 463
D+ QRA+ + +DRE+ + E+ E K + + AKE
Sbjct: 302 DKAKEDKQRAIREKQEAIDREKREKEEAEAKQKEEADRKAKE 343
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 323 HRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 463
HR+ + M +N+ L KA + ++ R K+E+ EKK+I + L ++
Sbjct: 405 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEK 449
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 323 HRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKE 463
HR+ + M +N+ L KA + ++ R K+E+ EKK+I + L ++
Sbjct: 407 HRLVKEMM--ENEAELKKARSEHEKLRSKLEKIEKKLIVGGENLLEK 451
>Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical
protein W03H9.1 protein.
Length = 794
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 391 EISHSFIESSLVLAEHLIRCHTMPK*PLHH 302
E+ H+F E + HL+ CH +P HH
Sbjct: 709 EMKHAFPEEIVTPKLHLLACHLIPYMREHH 738
>Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical
protein F52G2.3 protein.
Length = 651
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 383 RDLDRERMKMEQQEKKVIADIKKLAKE 463
RD R+KM + E+K IADI++ K+
Sbjct: 164 RDAAEVRLKMMEFERKRIADIQRTTKQ 190
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 320 GHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQ 469
G R+ P ML +A + M +ER+K E +E K + KK+ KEGQ
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ 1316
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 26.6 bits (56), Expect = 8.9
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 320 GHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIADIKKLAKEGQ 469
G R+ P ML +A + M +ER+K E +E K + KK+ KEGQ
Sbjct: 1272 GQRIEP--MLDAATKAKYEKMSQPKKERVKKEPKEPK---EPKKVKKEGQ 1316
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +2
Query: 278 HLISIKEVMMEWLFGHRM-TPDEMLRKNQ----RALNKAMRDLDRERMKMEQQEKKVIAD 442
H+I ++E+ WL G + + +LRK++ L + LD + + + E KVIA
Sbjct: 326 HMIFLRELETIWLLGEEVRNVERLLRKDRFSTISQLFNTIERLDIQSLNVLVDEAKVIAQ 385
Query: 443 IKK 451
K
Sbjct: 386 CAK 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,522,426
Number of Sequences: 27780
Number of extensions: 179170
Number of successful extensions: 550
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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