Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H16
(469 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 0.71
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 1.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 2.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 2.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 2.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 2.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 3.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 3.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 6.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 6.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 6.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 6.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 6.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 6.6
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 8.7
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 8.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 0.71
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 33 INCVLNCIFPENNKIKFIYLNNNSN*YDYIN 125
I+ + N NN K+ Y NNN N +Y N
Sbjct: 315 ISSLSNKTIHNNNNYKYNYNNNNYNNNNYNN 345
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 23.4 bits (48), Expect = 1.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 24 YCKINCVLNCIFPENNKIKFIYLNNNSN 107
Y + V +CIF + F+Y + N N
Sbjct: 61 YVRFKLVTDCIFVTSEPGYFLYTSKNDN 88
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDYINLGSV 137
NN K+ Y NNN N Y N+ +
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDYINLGSV 137
NN K+ Y NNN N Y N+ +
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDYINLGSV 137
NN K+ Y NNN N Y N+ +
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDYINLGSV 137
NN K+ Y NNN N Y N+ +
Sbjct: 92 NNNYKYNYNNNNYNKKLYYNINYI 115
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 42 HNLFCNNIKLKSSC 1
HN+F NNI S+C
Sbjct: 275 HNVFVNNILAASAC 288
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 33 INCVLNCIFPENNKIKFIYLNNNSN 107
I+ + N NN K+ Y NNN N
Sbjct: 82 ISSLSNRTIHNNNNYKYNYNNNNYN 106
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 33 INCVLNCIFPENNKIKFIYLNNNSN 107
I+ + N NN K+ Y NNN N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYNNNNYN 106
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 33 INCVLNCIFPENNKIKFIYLNNNSN 107
I+ + N NN K+ Y NNN N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYNNNNYN 106
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 2.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 33 INCVLNCIFPENNKIKFIYLNNNSN 107
I+ + N NN K+ Y NNN N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYNNNNYN 106
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDY 119
NN K+ Y NNN N +Y
Sbjct: 91 NNNYKYNYNNNNYNNNNY 108
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 66 NNKIKFIYLNNNSN*YDY 119
NN K+ Y NNN N +Y
Sbjct: 91 NNNYKYNYNNNNYNNNNY 108
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 3.8
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R+ R N+ R DR+ K+ +++K++ +
Sbjct: 224 FQHTSSRYSRERRCSRDRNREYRKKDRQYEKLHNEKEKLLEE 265
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 406 ENGATGEKSHS*YQETGEGRS 468
+N E+ + Y+ET +GRS
Sbjct: 269 QNSYKNEREYRKYRETSKGRS 289
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 213 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 254
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 406 ENGATGEKSHS*YQETGEGRS 468
+N E+ + Y+ET +GRS
Sbjct: 280 QNSYKNEREYRKYRETSKGRS 300
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 265
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 213 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 254
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 265
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 265
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 213 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 254
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 6.6
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 317 FGHRMTPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKVIAD 442
F H + R R N+ R DR+ K+ +++K++ +
Sbjct: 213 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEE 254
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 256 LIISLYLTFNIYKRSNDGVVIW 321
L+ LY+ F +G+VIW
Sbjct: 50 LLALLYILFTFLALLGNGLVIW 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 197 SCRHTQKIYTSL 162
SC++ +K+Y SL
Sbjct: 18 SCKYCEKVYVSL 29
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 20.6 bits (41), Expect = 8.7
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -2
Query: 72 YCFQEIYNSIHNLFCNNI 19
+C Q+I S+H+ N +
Sbjct: 13 HCIQQILESVHHCHHNGV 30
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,726
Number of Sequences: 438
Number of extensions: 2377
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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