Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H13
(547 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 260 1e-68
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 192 4e-48
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 190 2e-47
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 188 7e-47
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 173 2e-42
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 160 2e-38
UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5; Olig... 151 8e-36
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 142 4e-33
UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;... 132 4e-30
UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n... 130 2e-29
UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5; ... 126 3e-28
UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;... 118 9e-26
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 118 1e-25
UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1; Encephalit... 111 8e-24
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 110 2e-23
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 97 3e-19
UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal ... 83 3e-15
UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1; ... 82 9e-15
UniRef50_Q3LWJ2 Cluster: Ribosomal protein L18A; n=1; Bigelowiel... 38 0.15
UniRef50_A7GJR5 Cluster: Replication protein; n=1; Clostridium b... 35 1.1
UniRef50_A2R463 Cluster: Contig An14c0200, complete genome; n=9;... 34 2.5
UniRef50_Q61XF0 Cluster: Putative uncharacterized protein CBG040... 33 3.3
UniRef50_Q8I7W9 Cluster: Mitochondrial DNA polymerase A; n=2; Di... 33 4.3
UniRef50_Q3ISN2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_O80958 Cluster: Putative uncharacterized protein At2g39... 32 7.5
UniRef50_A7NYY0 Cluster: Chromosome chr6 scaffold_3, whole genom... 32 7.5
UniRef50_Q54VC1 Cluster: ABC transporter C family protein; n=1; ... 32 7.5
UniRef50_Q88GN3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_Q18UR0 Cluster: Transcriptional regulator, LysR family;... 32 9.9
UniRef50_A2F7M8 Cluster: ThiF family protein; n=1; Trichomonas v... 32 9.9
UniRef50_O51068 Cluster: Uncharacterized protein BB_0039; n=3; B... 32 9.9
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 260 bits (638), Expect = 1e-68
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 192 bits (468), Expect = 4e-48
Identities = 96/174 (55%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
LKEY+V+GRK+P+E EP P L++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV+I E
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
I E P+K K FGIW+RY+SRSG HNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 392 IK-VEVIKAAACRRPQVKQFHTSKIGFPLPKR---VHQYKRLNTFAYKRPSTYF 541
+K VEV K RR VKQ + FPLP R V FA RPST++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 190 bits (462), Expect = 2e-47
Identities = 87/170 (51%), Positives = 122/170 (71%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
+ E++V+GR +P+E + P +Y+MR+F+ I AKSRFWYFL ++ K KK+TGEI+++ E
Sbjct: 23 IHEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTE 82
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
I E P K+KNFG+++RY SRSG HN+Y+EYRDL+ GAV+Q Y +M +RH AR SI I
Sbjct: 83 IFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHI 142
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
I ++ I A+ RR KQFH SKI FPL R+ + K +TF RP+T+F
Sbjct: 143 IDIKEIAASLTRRANTKQFHDSKIKFPLTHRIAKSK--STFVANRPNTFF 190
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 188 bits (458), Expect = 7e-47
Identities = 80/146 (54%), Positives = 111/146 (76%)
Frame = +2
Query: 38 EYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIP 217
+Y+V+GR LP+E + +P +Y+M++++ + + AKS+FWYFLR+LKK KK+ G++++I EI
Sbjct: 8 QYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIY 67
Query: 218 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 397
EK+P IKNFGIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQIIK
Sbjct: 68 EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIK 127
Query: 398 VEVIKAAACRRPQVKQFHTSKIGFPL 475
+ A C+R KQFH SKI FPL
Sbjct: 128 TATVPAKLCKRESTKQFHNSKIKFPL 153
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 173 bits (421), Expect = 2e-42
Identities = 78/169 (46%), Positives = 116/169 (68%), Gaps = 2/169 (1%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
L +Y ++GR P++ P P Y+M +F+ + ++AKSRFWYF+++L K K++ GEI++
Sbjct: 20 LVQYHIVGRAAPTKKNPNPNTYRMSVFAKNSVLAKSRFWYFMKRLNKAKRSGGEILACNR 79
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
+ E ++KNFG+ LRY+SR+G HNMY+EYRDL+ GAV+Q Y DM RHRARA IQI
Sbjct: 80 LNEPKKGQVKNFGVLLRYKSRTGTHNMYKEYRDLTRTGAVSQMYGDMAGRHRARASCIQI 139
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLN--TFAYKRPS 532
I+V I + C++P+V Q H K+ FP+ K + +R + F+ KRPS
Sbjct: 140 IRVAEISDSDCKKPKVTQMHGKKLKFPILKPMPHVERKDRKLFSTKRPS 188
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 160 bits (388), Expect = 2e-38
Identities = 77/172 (44%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Frame = +2
Query: 29 ELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIK 208
++ +Y VIGR P+E P P ++++ IF+P+ +VAKSRF+YF+ +L K KK GEI+S+
Sbjct: 12 KVNQYMVIGRGKPTELNPHPKVFRVCIFAPNEVVAKSRFFYFMSRLNKVKKANGEILSVT 71
Query: 209 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 388
I EK P +KNF I L+Y SR+ V MY+EYRD+S GAV+Q Y ++ HRA+ SIQ
Sbjct: 72 RIFEKRPTYVKNFAILLQYRSRTNVVYMYKEYRDISKTGAVSQMYEELAGSHRAQRSSIQ 131
Query: 389 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRL--NTFAYKRPSTY 538
II+V I A +RP+ QF SK+ FP +++ + +TF RP+T+
Sbjct: 132 IIRVSQIDAKLAKRPKTTQFFNSKLKFPAIRKLPMAPKALRSTFTASRPTTF 183
>UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5;
Oligohymenophorea|Rep: 60S ribosomal L18A, putative -
Paramecium tetraurelia
Length = 192
Score = 151 bits (367), Expect = 8e-36
Identities = 69/174 (39%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Frame = +2
Query: 29 ELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIK 208
++++Y V GR+LPS+ +P P + MRIF+ + + AKSRFW+ LR+L K + + G+I++++
Sbjct: 17 KIRQYLVSGRRLPSKEDPNPKVISMRIFARNTVAAKSRFWWNLRRLNKLRPSHGQILAVQ 76
Query: 209 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 388
E+ E+ +K +GI L+Y+SR+ +HNMY+E+RD ++ GAV+Q Y++M HRA+ +I
Sbjct: 77 ELFERRDTNVKTYGIVLKYQSRTTIHNMYKEFRDTTLNGAVSQLYQEMAGNHRAQPQTIH 136
Query: 389 IIKVEVI-KAAACRRPQVKQFHTSKIGFPLPKRVHQ--YKRLNT-FAYKRPSTY 538
I++ V+ K+A +R + Q+ I FP+ K V + +K+ T F KRP+ Y
Sbjct: 137 ILRTSVLTKSADIKRGKTNQYRGDSIRFPIVKTVPRASHKKFRTVFKAKRPNLY 190
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 142 bits (345), Expect = 4e-33
Identities = 69/149 (46%), Positives = 96/149 (64%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
+++Y V GR+LPSE P+P +++M I++P+ IVAKSRFWY L+ LKK K+T GEI+ +
Sbjct: 2 MQKYIVYGRRLPSEKFPEPEVFRMTIYAPNEIVAKSRFWYHLKSLKKIKRTHGEILDCQH 61
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
I E +KNFG+ LRY SR G HNMYRE R+ + A+ + Y +M + RAR H IQI
Sbjct: 62 IEENGDF-VKNFGVLLRYRSRVGQHNMYREVRETTSARAMDKVYSEMAGQCRARYHDIQI 120
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLP 478
I V+ + RR +V F + FP P
Sbjct: 121 INVKEVADEDVRREKVAMFTQKGVRFPHP 149
>UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L18ae,
putative - Trichomonas vaginalis G3
Length = 213
Score = 132 bits (320), Expect = 4e-30
Identities = 57/151 (37%), Positives = 91/151 (60%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
LK+Y VIGR P++ PP ++++F+PD ++AKS+FW +++ + KK GE++++K
Sbjct: 3 LKQYLVIGRPYPTKEIANPPAVRVQVFAPDEVIAKSKFWTVAQRIARLKKAHGEVLAVKH 62
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
+ E P ++KN+GIWL Y S HN+Y+EYRD + GAVT+ ++ H A +I I
Sbjct: 63 VIEPEPTRVKNYGIWLSYRSTRNHHNVYKEYRDTTTEGAVTKMLAELAGTHDTTADNISI 122
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKR 484
IKV + + QF I FP+ K+
Sbjct: 123 IKVAEVADKDLVHKNISQFTHENIKFPILKQ 153
>UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18a,
putative - Leishmania major
Length = 179
Score = 130 bits (314), Expect = 2e-29
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Frame = +2
Query: 23 KGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVS 202
K L+ Y+V+GR+ PSE P+P +YK +F+P+ +VAKSRFW +R K K T G+++S
Sbjct: 3 KPHLRHYQVVGRESPSEKNPEPTVYKFEVFAPNFVVAKSRFWRMMRVKNKVKATHGDVLS 62
Query: 203 IKEIPEKSPVKIKNFGIWLRYES-RSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAH 379
K + + V +N+ + + Y S R G M +E+RD+S GAV+Q Y D+ +RHRAR H
Sbjct: 63 CKVVKDAKLV-ARNYLVDIAYYSQRCGYTRMVKEFRDVSKTGAVSQAYHDLASRHRARYH 121
Query: 380 SIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPST 535
+I+++ V+ I + + Q+H + FPL +R + R + + + +T
Sbjct: 122 NIEVLNVKSIPDHEVKHLSIAQYHAPNLSFPLLQRRTKATRKDRAIFVKKNT 173
>UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 153
Score = 126 bits (305), Expect = 3e-28
Identities = 74/170 (43%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
L EY+VI RKLP ++ L+K++ F+P IVAK RF + KFK+TT EIVS+K
Sbjct: 3 LMEYQVIARKLPKKNR-NASLFKIKTFAPAQIVAKFRF------VSKFKQTTSEIVSVKR 55
Query: 212 IPEKSPVKIKNFG-IWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 388
I EK+P+++ + G + LRY+S SG H + + CY +RHRARAHSI+
Sbjct: 56 ILEKTPLRLMSLGMVRLRYDSCSGTHKV------------LLFCYSGTPSRHRARAHSIK 103
Query: 389 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTY 538
IIKVE +K + RR +KQF+ SKI F L +R H + F++ +P TY
Sbjct: 104 IIKVESVKTSKTRRVHIKQFYDSKIRFLLVQRYHHKRYRKLFSFCQPDTY 153
>UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18a - Entamoeba histolytica HM-1:IMSS
Length = 173
Score = 118 bits (284), Expect = 9e-26
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 2/161 (1%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
+KEY + R P +++ R+F+P+ +VAKS+FW L++ K KK E++ +
Sbjct: 1 MKEYYITARCTDKAHNPNE-IFRSRVFAPNYVVAKSKFWMMLKKQHKVKKINAELLQCQP 59
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
I EK+P +KN+ I+LRY S G+HN+ ++YRD++ GAV Q Y D+ +++R R IQ+
Sbjct: 60 IFEKNPTVVKNYQIFLRYVSAGGIHNITKQYRDVTRVGAVRQMYNDLASQYRTRQDKIQL 119
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLP--KRVHQYKRLN 508
I + + A + P + QF + FP+ K V KR N
Sbjct: 120 ISITTVGDKAVKNPVLHQFVGHHVKFPMVHCKPVIASKRFN 160
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 118 bits (283), Expect = 1e-25
Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 6/131 (4%)
Frame = +2
Query: 167 KKFKKTTGEIVSI-----KEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAV 331
KK + G++V I ++I EK P+K+KNF +WLRY SRSG HNMY+E+R LS A
Sbjct: 404 KKKRSGHGQMVPIIVYLCRKIHEKKPIKVKNFAVWLRYNSRSGTHNMYKEFRALSRAEAA 463
Query: 332 TQCYRDMGARHRARAHSIQIIKV-EVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLN 508
Y+DM ARHRAR SI I+K+ E+ K+ +RP +KQ + FPLP R + + +
Sbjct: 464 ESLYQDMAARHRARFASIHILKIAEIEKSEDVKRPYIKQLMAPGLKFPLPHR--RPRHVG 521
Query: 509 TFAYKRPSTYF 541
TFA +RP+T++
Sbjct: 522 TFAGQRPNTFY 532
Score = 89.0 bits (211), Expect = 6e-17
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = +2
Query: 2 HEAKMKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKK 181
H++ + L EY VIGR LP+E EP P LY+MRIF+ + VA+SRFWYF+RQL+K KK
Sbjct: 302 HQSHLLKMTRLTEYMVIGRHLPTEKEPSPKLYRMRIFAVNKSVAESRFWYFVRQLRKMKK 361
Query: 182 TTGEIVSI 205
TGEIV+I
Sbjct: 362 ATGEIVAI 369
>UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN L18A -
Encephalitozoon cuniculi
Length = 173
Score = 111 bits (268), Expect = 8e-24
Identities = 53/157 (33%), Positives = 90/157 (57%)
Frame = +2
Query: 35 KEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEI 214
KEY + G +P+E P+P ++ IF+ + + AK++F+ L + K K T G I+ KEI
Sbjct: 7 KEYRIHGSAMPTEDNPRPQVFVGTIFTKNHVFAKAKFFKILEKKYKIKATKGLIIDCKEI 66
Query: 215 PEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQII 394
PE S +++N+GI Y SRSGVHN Y+E R +S A+ R++ R + + ++ II
Sbjct: 67 PEPSFKEVQNYGIRFVYRSRSGVHNAYKECRAISKCWAIDHVLRELAGRQKLKRSAVDII 126
Query: 395 KVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRL 505
V+V+ + +R + +F + FP+ ++ K L
Sbjct: 127 SVDVVPVESLKRAKTIEFADENVEFPIFTKIVNTKSL 163
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 110 bits (265), Expect = 2e-23
Identities = 55/157 (35%), Positives = 91/157 (57%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 211
LK+Y + ++S+ +Y M+ FSP+ I AKS+FW L++ +K KK G I+ ++
Sbjct: 4 LKQYLCLANNNTNKSDS---IYFMKNFSPNKITAKSKFWSVLKKTQKLKKKNGSIIIAQK 60
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 391
I EK +K +GIW + + ++G N+++EYRD + GAV Q Y ++G R + + + I
Sbjct: 61 IYEKKNNFVKTYGIWSKVKIKNGYVNLFKEYRDFMMTGAVEQFYIELGGRFKIKPKDVTI 120
Query: 392 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKR 502
++VE IK + VKQF KI +P+ + Q R
Sbjct: 121 LRVERIKEIESSKSNVKQFLGKKINYPITQHFVQKSR 157
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 96.7 bits (230), Expect = 3e-19
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Frame = +2
Query: 218 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 397
++ +KNFGIW+RY+SR+G HN Y+EYR+ ++ AV Y +M +RHR R+ +QIIK
Sbjct: 143 DEDTTTVKNFGIWIRYQSRTGFHNSYKEYRETTMNKAVDALYEEMASRHRVRSSQLQIIK 202
Query: 398 VEVIKAAACRRPQVKQFHTSKIGFPLPKRV--HQYKRLNT-FAYKRPS 532
+ + RR +QF + FP+ +V H K T F YKRP+
Sbjct: 203 IAEVSDENVRRENTRQFLAEDLSFPVVNKVMRHPSKATKTIFKYKRPN 250
Score = 47.2 bits (107), Expect = 2e-04
Identities = 14/40 (35%), Positives = 33/40 (82%)
Frame = +2
Query: 29 ELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFW 148
+ ++++V+GR LP+E+ P+P +++M++++ D + A+S+FW
Sbjct: 11 QYRQFQVVGRHLPTEATPEPEVFRMKLWALDDVKARSKFW 50
>UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal
protein L18a, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L18a, partial -
Macaca mulatta
Length = 124
Score = 83.4 bits (197), Expect = 3e-15
Identities = 36/56 (64%), Positives = 47/56 (83%)
Frame = +2
Query: 32 LKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIV 199
L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV
Sbjct: 65 LREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIV 120
>UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 175
Score = 81.8 bits (193), Expect = 9e-15
Identities = 44/95 (46%), Positives = 60/95 (63%)
Frame = +2
Query: 38 EYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIP 217
EY+ I KL S+ + P L+K++IF+P IV K FW F+RQL +FKKTT EIV +K I
Sbjct: 2 EYQAIAHKL-SKKDRNPLLFKIKIFAPAQIVPKCHFWCFMRQLCQFKKTTSEIVLVKRIL 60
Query: 218 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
EK+P+++ N G LR R G + R +R L G
Sbjct: 61 EKTPLRLMNLGRRLR---RRGFTTITRRWRALCCG 92
>UniRef50_Q3LWJ2 Cluster: Ribosomal protein L18A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L18A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 172
Score = 37.9 bits (84), Expect = 0.15
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = +2
Query: 173 FKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDM 352
FK+ +I+S + I K G+WL Y ++ ++ Y E S+ Q
Sbjct: 62 FKQKDFKIMSSQVISSLVHTSPKVIGVWLIYRNKYFYNSSYIELNCTSLNECYDQALNLF 121
Query: 353 GARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPL 475
+R++ I IIK +++ ++ + Q+ + + PL
Sbjct: 122 SSRYKINKKHIIIIKTKILSTDEIKKMSILQYKSMSLKLPL 162
>UniRef50_A7GJR5 Cluster: Replication protein; n=1; Clostridium
botulinum F str. Langeland|Rep: Replication protein -
Clostridium botulinum (strain Langeland / NCTC 10281 /
Type F)
Length = 463
Score = 35.1 bits (77), Expect = 1.1
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 291 ILWTPERDS*RNQIPK--FLILTGLFSGISLMDTISPVVF--LNFFNCLKKYQKRDFATI 124
I+W E D R ++P+ F+ILTG GI++ I PV + L +N ++K+ ++ I
Sbjct: 130 IIWQLECDYFREKVPEANFIILTG--RGIAIYWLIEPVPYKALPLWNAVQKHFLKELKDI 187
Query: 123 GSGEK 109
G+ EK
Sbjct: 188 GADEK 192
>UniRef50_A2R463 Cluster: Contig An14c0200, complete genome; n=9;
Trichocomaceae|Rep: Contig An14c0200, complete genome -
Aspergillus niger
Length = 609
Score = 33.9 bits (74), Expect = 2.5
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +2
Query: 5 EAKMKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFS--PDPIVAKSRFWYFLRQLKKFK 178
EA + E+++ VIG S P + +R S + A + + RQL +K
Sbjct: 490 EAALLKHPEIEDAAVIGVTSRDGSTELPRAFVVRAKSLTGSRLTADDVYNFTRRQLASYK 549
Query: 179 KTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSV 319
G ++ ++EIP + KI+ F + R V N+ ++ S+
Sbjct: 550 ALDGGVIFVEEIPRTASGKIQRFKLSQMNTYREIVSNLLARFKGASM 596
>UniRef50_Q61XF0 Cluster: Putative uncharacterized protein CBG04012;
n=2; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG04012 - Caenorhabditis
briggsae
Length = 538
Score = 33.5 bits (73), Expect = 3.3
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 116 PDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMY 295
P P A + + +L K K G + E EK+ K + W+R +G+ +
Sbjct: 199 PPPPTAPAPVYQPSAELFKKSKEKGGTIDEAEASEKAKRK-EMINNWIRQVLTNGIEGLK 257
Query: 296 REYRDLSVGGAVTQ 337
+EY+D GG + Q
Sbjct: 258 KEYKDAPNGGTIEQ 271
>UniRef50_Q8I7W9 Cluster: Mitochondrial DNA polymerase A; n=2;
Dictyostelium discoideum|Rep: Mitochondrial DNA
polymerase A - Dictyostelium discoideum (Slime mold)
Length = 1369
Score = 33.1 bits (72), Expect = 4.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 253 DTKVLNLNRTLFWNFLDGYNFTS 185
D K ++RT F+NFLD YNFTS
Sbjct: 545 DIKYKPIDRTKFYNFLDKYNFTS 567
>UniRef50_Q3ISN2 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 751
Score = 33.1 bits (72), Expect = 4.3
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 5 EAKMKAKGELKEYEVIGRKLPSESEPKP 88
EAK KA+GE+ Y+V+G +LP+ P+P
Sbjct: 158 EAKSKAEGEVGIYDVVGVQLPAVDIPEP 185
>UniRef50_O80958 Cluster: Putative uncharacterized protein
At2g39230; n=2; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g39230 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 867
Score = 32.3 bits (70), Expect = 7.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 KPPLYKMRIFSPDPIVAKSRFWYFL-RQLKKFKKTTGEIVSIKEIPEKSPV 232
+PP++ R +P PI +++RF + Q + +T E +S E P K+ V
Sbjct: 11 RPPIFLHRFINPKPISSQTRFLHPPDNQSRDISDSTTETISTLEFPHKTSV 61
>UniRef50_A7NYY0 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 658
Score = 32.3 bits (70), Expect = 7.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 41 YEVIGRKLPSESEPKPPLYKMRIFSPD 121
Y+V+G + P + P PP Y + + SPD
Sbjct: 105 YDVLGNRSPPQPPPNPPPYHVHLHSPD 131
>UniRef50_Q54VC1 Cluster: ABC transporter C family protein; n=1;
Dictyostelium discoideum AX4|Rep: ABC transporter C
family protein - Dictyostelium discoideum AX4
Length = 1436
Score = 32.3 bits (70), Expect = 7.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -2
Query: 252 IPKFLILTGLFSGISLMDTISPVVFLNFFNCLKKYQKRDFATIG 121
+P+ I TGLF +S+ I+P++ NF + ++K ++ IG
Sbjct: 125 LPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIG 168
>UniRef50_Q88GN3 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida KT2440|Rep: Putative uncharacterized
protein - Pseudomonas putida (strain KT2440)
Length = 232
Score = 31.9 bits (69), Expect = 9.9
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 188 GEIVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYR 307
G+ V++ I + S +K KNFG+ +E+ +GV + +YR
Sbjct: 101 GDDVTLYAIVKNSKMKEKNFGVLYGFENSNGVRSFATKYR 140
>UniRef50_Q18UR0 Cluster: Transcriptional regulator, LysR family;
n=2; Desulfitobacterium hafniense|Rep: Transcriptional
regulator, LysR family - Desulfitobacterium hafniense
(strain DCB-2)
Length = 313
Score = 31.9 bits (69), Expect = 9.9
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIF-SPDPIVAKSRFWYFLRQLKKFKK 181
++A+ +K+Y+ + +L S + K P YK R+F DP +A + L++L K K
Sbjct: 66 VRARDFVKQYQELQEELQSFQKDKTPSYKARLFLYIDPFMANTFLPRILKKLHKQSK 122
>UniRef50_A2F7M8 Cluster: ThiF family protein; n=1; Trichomonas
vaginalis G3|Rep: ThiF family protein - Trichomonas
vaginalis G3
Length = 504
Score = 31.9 bits (69), Expect = 9.9
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 44 EVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPE 220
+VI +L EP P I + + + FW +R +KKFK+ TG+ I IP+
Sbjct: 263 DVIDNRLQFFREPNYPNLTKAIKQSEKM-PDTDFWKCVRAIKKFKEDTGDYPVIDTIPD 320
>UniRef50_O51068 Cluster: Uncharacterized protein BB_0039; n=3;
Borrelia burgdorferi group|Rep: Uncharacterized protein
BB_0039 - Borrelia burgdorferi (Lyme disease spirochete)
Length = 500
Score = 31.9 bits (69), Expect = 9.9
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 59 KLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPVKI 238
K P E K LY I + +V+ ++++ L + K+ I S++E P+KI
Sbjct: 256 KTPFEELAK--LYSDDIANFKGVVSLDKYYFDLDLNVEKKEDLNSIFSLREGEFSKPIKI 313
Query: 239 KNFGIWLRYESRSGVHNMYREY-RDLS 316
KN + Y++ S VH+ + RD+S
Sbjct: 314 KNKNEYQIYKAFSNVHDFDKNSDRDIS 340
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,764,984
Number of Sequences: 1657284
Number of extensions: 10369091
Number of successful extensions: 30558
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 29715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30547
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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