Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H13
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 260 2e-69
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 260 2e-69
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 260 2e-69
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 260 2e-69
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 260 2e-69
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 260 2e-69
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 205 7e-53
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 171 1e-42
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-cryst... 31 3.5
AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.5
AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1 pr... 31 3.5
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.0
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 29 8.0
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.0
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.0
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.0
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.0
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 29 8.0
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 260 bits (638), Expect = 2e-69
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IV ++ EKSP+++KNFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 205 bits (501), Expect = 7e-53
Identities = 92/135 (68%), Positives = 113/135 (83%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
MKA G L+EY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
V ++ EKSP+++KNFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 TVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAA 418
AHSIQI+ VE I A+
Sbjct: 121 AHSIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 171 bits (417), Expect = 1e-42
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +2
Query: 209 EIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQ 388
++ EKSP+++KNFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ
Sbjct: 30 QVFEKSPLRVKNFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQ 89
Query: 389 IIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
I+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 90 IMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2
Query: 344 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYK 523
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 524 RPSTYF 541
RP+T+F
Sbjct: 61 RPNTFF 66
>U83115-1|AAB53791.1| 1637|Homo sapiens non-lens beta gamma-crystallin
like protein protein.
Length = 1637
Score = 30.7 bits (66), Expect = 3.5
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 26 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 205
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1114 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1169
Query: 206 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 325
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1170 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1214
>AL390074-1|CAH72091.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.5
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 26 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 205
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 206 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 325
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>AL359292-2|CAI21046.1| 1723|Homo sapiens absent in melanoma 1
protein.
Length = 1723
Score = 30.7 bits (66), Expect = 3.5
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +2
Query: 26 GELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSI 205
G ++ ++ GRK+ ++PK +Y+ F + ++ F+ + + ++ TG+
Sbjct: 1200 GSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGD---- 1255
Query: 206 KEIPEKSPVKIKNF-GIWLRYESRSGVHNMY----REYRDLSVGG 325
+P S +K GIW+ YE + Y EYRD G
Sbjct: 1256 DHLPFTSVGSMKVLRGIWVAYEKPGFTGHQYLLEEGEYRDWKAWG 1300
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 88 SSIQNEDF-LS*SYCGKISFLVFLEAVEEVQ 177
S+IQN+DF + YC + L++L+++EE+Q
Sbjct: 817 SAIQNQDFTVIEDYCTGLKALLYLKSIEELQ 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,781,258
Number of Sequences: 237096
Number of extensions: 1613434
Number of successful extensions: 3779
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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