Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H13
(547 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 295 2e-80
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 295 2e-80
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 295 2e-80
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 36 0.036
BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p pro... 31 1.3
AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA... 31 1.3
BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p pro... 29 4.1
AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA... 29 4.1
AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p pro... 28 9.5
AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-P... 28 9.5
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB... 28 9.5
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA... 28 9.5
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 295 bits (725), Expect = 2e-80
Identities = 138/176 (78%), Positives = 152/176 (86%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 295 bits (725), Expect = 2e-80
Identities = 138/176 (78%), Positives = 152/176 (86%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 295 bits (725), Expect = 2e-80
Identities = 138/176 (78%), Positives = 152/176 (86%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSIKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVSIK++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 541
AHSIQIIKV+ I AA RR VKQFH SKI FPL +RVH F++++P TYF
Sbjct: 121 AHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLP 67
M+AKG LKEYEV+GRKLP
Sbjct: 1 MRAKGLLKEYEVVGRKLP 18
>BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p
protein.
Length = 527
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 104 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPV 232
RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA
protein.
Length = 527
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 104 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKEIPEKSPV 232
RI PI + S +++ L LKK EI S+ P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p protein.
Length = 1325
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 244 VLNLNRTLFWNFLDGYNFTSSLFELLQLP-QEIPE 143
+L+L R LF N D Y F +++FE +P IPE
Sbjct: 940 LLHLERILFENGYDNYKFVNNVFEEPDIPLLHIPE 974
>AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA
protein.
Length = 1348
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 244 VLNLNRTLFWNFLDGYNFTSSLFELLQLP-QEIPE 143
+L+L R LF N D Y F +++FE +P IPE
Sbjct: 940 LLHLERILFENGYDNYKFVNNVFEEPDIPLLHIPE 974
>AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p
protein.
Length = 432
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
+ EK P +KN L E+ +GVHN+Y+ +++ +G
Sbjct: 139 VHEKFPQYLKNIK-GLSEETTTGVHNLYKMFKEGRLG 174
>AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-PA
protein.
Length = 432
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
+ EK P +KN L E+ +GVHN+Y+ +++ +G
Sbjct: 139 VHEKFPQYLKNIK-GLSEETTTGVHNLYKMFKEGRLG 174
>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
isoform B protein.
Length = 4685
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 277 RARLVTQPDTKVLNLNRTLFWNFLDGYNFTSSLFELLQLPQEIPE 143
R RL+ +TK+L LNR L NF +N+ S F+L + E
Sbjct: 903 RLRLLQCDETKML-LNRLLIANFCLFFNYESQEFQLYSRDLSVQE 946
>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
isoform A protein.
Length = 4543
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 277 RARLVTQPDTKVLNLNRTLFWNFLDGYNFTSSLFELLQLPQEIPE 143
R RL+ +TK+L LNR L NF +N+ S F+L + E
Sbjct: 858 RLRLLQCDETKML-LNRLLIANFCLFFNYESQEFQLYSRDLSVQE 901
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,727,231
Number of Sequences: 53049
Number of extensions: 484977
Number of successful extensions: 1366
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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