Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H12
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.3  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 132 HLEAINCLST*SCQLILN 79
           HL A N LS   C+L+L+
Sbjct: 83  HLAAANILSPEDCELVLS 100


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 132 HLEAINCLST*SCQLILN 79
           HL A N LS   C+L+L+
Sbjct: 83  HLAAANILSPEDCELVLS 100


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 116 TVCRHNLASSF*ISSIKNKTTLD 48
           T+ R  L SSF ISSI  +T L+
Sbjct: 13  TMARTPLKSSFSISSILPETALE 35


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 325 CAYDTFCTAEVDVP 284
           C  +  CT +VD+P
Sbjct: 562 CGQNCMCTHQVDIP 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,044
Number of Sequences: 336
Number of extensions: 2196
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)