Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H11
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    20   8.2  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    20   8.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   8.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   8.2  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 158 CGLYSLRQLIGLFVCHGSRSSQGHQYN 78
           CG  +     G F C G +S  G  YN
Sbjct: 8   CGEPAAGFHFGAFTCEGCKSFFGRTYN 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 108  EPLEPGPPIQRESTGNAYRRPLVAE 34
            +P EPG  +      NAY R ++ E
Sbjct: 1101 QPCEPGQYVPDPHNCNAYYRCVLGE 1125


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 143

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 56 IAGRLSPRSQTTMWFHP 6
          +AG+  P     M+ HP
Sbjct: 42 VAGKADPEMPKRMYIHP 58


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 134

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 56 IAGRLSPRSQTTMWFHP 6
          +AG+  P     M+ HP
Sbjct: 42 VAGKADPEMPKRMYIHP 58


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 282 RPIYRELAQVLQQ 244
           +PI+ E+AQV +Q
Sbjct: 14  KPIHEEVAQVWEQ 26


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = -1

Query: 96  PGPPIQRESTGNAYRRPLVAEESDYNVVS 10
           P   +QR      YRR     +  Y+ +S
Sbjct: 119 PNSALQRARADKTYRRSYTHAKPPYSYIS 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,819
Number of Sequences: 336
Number of extensions: 1194
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)