Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H11
         (345 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    20   7.2  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    20   7.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   9.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 145 LYNPQLMILYS*LHSTTGRTLTP 213
           LY PQ M +   L   TGR++ P
Sbjct: 369 LYQPQGMNILGDLIEGTGRSVNP 391


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 93  GPPIQRESTGNAYRRPLVAEESDYNVVS 10
           G P+ +     AY++ + +E++ YN++S
Sbjct: 256 GLPLWKLLPTCAYKQLIESEDAIYNIIS 283


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 50  GRLSPRSQTTMW 15
           GR  P+S T MW
Sbjct: 343 GRFPPQSLTDMW 354


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 50  GRLSPRSQTTMW 15
           GR  P+S T MW
Sbjct: 311 GRFPPQSLTDMW 322


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 108 EPLEPGPPIQ 79
           EPL P PPI+
Sbjct: 373 EPLPPPPPIR 382


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 210 SQCPSRRGMKSGIEYHQLW 154
           S+C  R    SG+ + ++W
Sbjct: 17  SRCSVRCSAASGLRWFEIW 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,305
Number of Sequences: 438
Number of extensions: 1640
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)