Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H10
(453 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 27 0.082
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 27 0.082
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 27 0.082
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 27 0.082
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.44
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 4.1
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 5.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 7.1
AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 7.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 20 9.4
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 20 9.4
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.082
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 322 VPDLLHVIPVGDDTVFD 272
+PD+ +IP GDDT D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.082
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 322 VPDLLHVIPVGDDTVFD 272
+PD+ +IP GDDT D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.082
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 322 VPDLLHVIPVGDDTVFD 272
+PD+ +IP GDDT D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 27.1 bits (57), Expect = 0.082
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 322 VPDLLHVIPVGDDTVFD 272
+PD+ +IP GDDT D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 24.6 bits (51), Expect = 0.44
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 284 IITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379
++T+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 4.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 132 TTRLAPSSRPSWVALATRVSWSAWDRRTLT 221
TTR ++RP+ + TR + + W + T
Sbjct: 1056 TTRRTTTTRPTTTSTTTRPTTTNWPTQGTT 1085
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.0 bits (42), Expect = 5.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 5 MLP*SQYPPRPDTKTHAKMCDDDV 76
M P + P PD H+ + D DV
Sbjct: 644 MAPSTCQPQNPDNDVHSIVDDSDV 667
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 238 EQERYPHPEVPHRTRYHHQLG*H 306
E +R P+ P T Y H L H
Sbjct: 227 EDKRLTCPKCPFITEYKHHLEYH 249
>AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH
transcription factor protein.
Length = 193
Score = 20.6 bits (41), Expect = 7.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 253 PHPEVPHRTRYHHQ 294
PH EVP Y+H+
Sbjct: 16 PHQEVPPPFGYYHE 29
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 20.2 bits (40), Expect = 9.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 432 NMIWVIFSLFALGFRGASVSRTGCSSGATRSSL*KVW 322
N+ ++ F + L A SRT S+ T + + ++W
Sbjct: 320 NLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIW 356
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 20.2 bits (40), Expect = 9.4
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 432 NMIWVIFSLFALGFRGASVSRTGCSSGATRSSL*KVW 322
N+ ++ F + L A SRT S+ T + + ++W
Sbjct: 276 NLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIW 312
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,082
Number of Sequences: 336
Number of extensions: 2027
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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