Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H10
(453 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 283 2e-78
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 283 2e-78
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 283 2e-78
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 276 2e-76
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 2.2
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 23 3.8
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 23 3.8
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 3.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 3.8
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 5.0
DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription fact... 23 6.7
DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription fact... 23 6.7
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 22 8.8
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 283 bits (695), Expect = 2e-78
Identities = 127/131 (96%), Positives = 131/131 (100%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSP 451
TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 283 bits (695), Expect = 2e-78
Identities = 127/131 (96%), Positives = 131/131 (100%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSP 451
TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 283 bits (695), Expect = 2e-78
Identities = 127/131 (96%), Positives = 131/131 (100%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNSP 451
TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 276 bits (677), Expect = 2e-76
Identities = 124/131 (94%), Positives = 127/131 (96%)
Frame = +2
Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCDDD ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120
Query: 419 TQIMFETFNSP 451
TQIMFETF +P
Sbjct: 121 TQIMFETFAAP 131
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 2.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 166 GSPSPPGCHGRHGTEGL 216
G P PPG +G G +GL
Sbjct: 716 GPPGPPGFNGPKGDKGL 732
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 3.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 99 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 224
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.4 bits (48), Expect = 3.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 99 APACAKPVSPVTTRLAPSSRPSWVALATRVSWSAWDRRTLTS 224
APA AKP + APSS + + R S+ D ++ TS
Sbjct: 411 APATAKPTPKPIPKPAPSSETNGSSSQERGMESSDDAKSETS 452
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 3.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 175 SPPGCHGRHGTEGLLRR**GPEQERYPH 258
+P CHGR GT+ + Q RY H
Sbjct: 2342 NPSLCHGREGTKSIFND--FIHQHRYSH 2367
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 54 PKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSR 158
P+ + ++ S + AP A+P P TTR AP R
Sbjct: 86 PQPSLAPVVPSSVVTAPP-ARPSQPPTTRFAPEPR 119
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 5.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 175 SPPGCHGRHGTEGLLRR**GPEQERYPH 258
+P CHGR GT+ + Q RY H
Sbjct: 2332 NPSLCHGREGTKSIFSD--FIHQHRYSH 2357
>DQ080821-1|AAY89467.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 6.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 176 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 331
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>DQ080820-1|AAY89466.1| 170|Anopheles gambiae transcription factor
3C protein.
Length = 170
Score = 22.6 bits (46), Expect = 6.7
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 176 RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 331
RH ++ KDSY EA+ KYP+ DD++ W F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 22.2 bits (45), Expect = 8.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 36 PTQKHTPKCATTMLLRS*LTMAPACAKPVSPVTTRLAPSSRPSWVALAT 182
PT P ATT + + T+AP V+P TT + + +A+
Sbjct: 25 PTTTVAP--ATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAS 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,169
Number of Sequences: 2352
Number of extensions: 10343
Number of successful extensions: 43
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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