BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_H10 (453 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 287 3e-78 Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 285 1e-77 Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 285 1e-77 X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 285 1e-77 X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 285 1e-77 X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 285 1e-77 X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 285 1e-77 U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 285 1e-77 Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 274 2e-74 U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 246 6e-66 U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 192 1e-49 J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 2e-48 J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48 J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48 J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 8e-47 AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 1e-39 Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 125 1e-29 AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 107 5e-24 AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 4e-14 Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06 U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06 AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.39 AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 0.69 Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 30 0.91 AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 30 0.91 Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 2.8 AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 28 3.7 AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.7 AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 4.8 Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 6.4 Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 6.4 U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 6.4 Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 8.4 Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.4 Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.4 U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 27 8.4 >Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.5 protein. Length = 376 Score = 287 bits (703), Expect = 3e-78 Identities = 129/131 (98%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.6 protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical protein T04C12.4 protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. Length = 375 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 127/131 (96%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4, isoform a protein. Length = 376 Score = 285 bits (699), Expect = 1e-77 Identities = 128/131 (97%), Positives = 131/131 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418 SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 419 TQIMFETFNSP 451 TQIMFETFN+P Sbjct: 121 TQIMFETFNTP 131 >Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical protein T25C8.2 protein. Length = 375 Score = 274 bits (672), Expect = 2e-74 Identities = 121/129 (93%), Positives = 129/129 (100%) Frame = +2 Query: 65 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244 ++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424 RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121 Query: 425 IMFETFNSP 451 IMFETFN+P Sbjct: 122 IMFETFNTP 130 >U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4, isoform c protein. Length = 362 Score = 246 bits (602), Expect = 6e-66 Identities = 110/113 (97%), Positives = 113/113 (100%) Frame = +2 Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 292 +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64 Query: 293 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 451 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 117 >U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4, isoform b protein. Length = 332 Score = 192 bits (467), Expect = 1e-49 Identities = 85/87 (97%), Positives = 87/87 (100%) Frame = +2 Query: 191 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 370 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60 Query: 371 LLTEAPLNPKANREKMTQIMFETFNSP 451 LLTEAPLNPKANREKMTQIMFETFN+P Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTP 87 >J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene IV, 5' end. ). Length = 86 Score = 188 bits (458), Expect = 2e-48 Identities = 85/86 (98%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene III, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 5e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene I, 5' end. ). Length = 86 Score = 186 bits (454), Expect = 5e-48 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316 SKRGILTLKYPIEHGI+TNWDDMEKI Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86 >J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.elegans (nematode)actin gene II, 5' end. ). Length = 83 Score = 182 bits (444), Expect = 8e-47 Identities = 82/83 (98%), Positives = 83/83 (100%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 239 SKRGILTLKYPIEHGIITNWDDM 307 SKRGILTLKYPIEHGI+TNWDDM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83 >AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical protein Y53F4B.22 protein. Length = 374 Score = 159 bits (385), Expect = 1e-39 Identities = 71/133 (53%), Positives = 97/133 (72%), Gaps = 4/133 (3%) Frame = +2 Query: 65 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 235 D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61 Query: 236 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 412 +S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121 Query: 413 KMTQIMFETFNSP 451 + +I FETFN P Sbjct: 122 RSAEIFFETFNVP 134 >Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical protein K07C5.1 protein. Length = 395 Score = 125 bits (302), Expect = 1e-29 Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 3/123 (2%) Frame = +2 Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 256 +VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68 Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128 Query: 434 ETF 442 E + Sbjct: 129 EQY 131 >AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex component protein 1 protein. Length = 425 Score = 107 bits (256), Expect = 5e-24 Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 13/144 (9%) Frame = +2 Query: 59 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 202 M + A V+DNG+G K G+AG+ P+ + PS V Q V G+ Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60 Query: 203 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379 D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120 Query: 380 EAPLNPKANREKMTQIMFETFNSP 451 E PLN NRE +IMFE+FN P Sbjct: 121 EPPLNTPENREYTAEIMFESFNVP 144 >AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical protein ZK616.4 protein. Length = 436 Score = 74.1 bits (174), Expect = 4e-14 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 17/145 (11%) Frame = +2 Query: 68 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 241 D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+ Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68 Query: 242 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376 KR G + P ++ G+I +W+ EKI H++ N L P EHPVL Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128 Query: 377 TEAPLNPKANREKMTQIMFETFNSP 451 +E+ N +A REK+T+IMFE F P Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVP 153 >Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical protein C08B11.6 protein. Length = 418 Score = 49.6 bits (113), Expect = 1e-06 Identities = 33/123 (26%), Positives = 58/123 (47%) Frame = +2 Query: 74 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 434 ETF 442 + F Sbjct: 116 DYF 118 >U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related protein-like protein. Length = 418 Score = 49.6 bits (113), Expect = 1e-06 Identities = 33/123 (26%), Positives = 58/123 (47%) Frame = +2 Query: 74 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253 + ++ DNG K G ++PR V SIV + +H+ V + + +E K + Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57 Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433 ++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115 Query: 434 ETF 442 + F Sbjct: 116 DYF 118 >AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical protein F59E12.1 protein. Length = 811 Score = 31.1 bits (67), Expect = 0.39 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 Query: 204 PMPTMTPWWRGRPTMDGKTARGASSPAKPALHMPEPL 94 P T TP RGRP + ++ P P P+PL Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372 >AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen protein 99 protein. Length = 627 Score = 30.3 bits (65), Expect = 0.69 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQER-YPHPEVP 270 G P P G G HGTEG + GPE + YP P P Sbjct: 510 GPPGPMGLRGPHGTEGETGK-QGPEGSKGYPGPMGP 544 >Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical protein C41C4.4 protein. Length = 967 Score = 29.9 bits (64), Expect = 0.91 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -3 Query: 187 TLVARATHDGREDGARRVVTGETGFAHAGA 98 T+V R T DGRE +RVV+ FAH A Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560 >AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein kinase protein. Length = 967 Score = 29.9 bits (64), Expect = 0.91 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -3 Query: 187 TLVARATHDGREDGARRVVTGETGFAHAGA 98 T+V R T DGRE +RVV+ FAH A Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560 >Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical protein C30F2.1 protein. Length = 307 Score = 28.3 bits (60), Expect = 2.8 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGL 216 G P PPGC G G GL Sbjct: 112 GPPGPPGCRGEPGPSGL 128 >AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical protein Y37H2C.1 protein. Length = 718 Score = 27.9 bits (59), Expect = 3.7 Identities = 17/75 (22%), Positives = 28/75 (37%) Frame = +2 Query: 41 TKTHAKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 220 +K H D L++ +C GF G A + + G HQ + + + Sbjct: 495 SKRHGMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKV 554 Query: 221 VGDEAQSKRGILTLK 265 + D+ KR L K Sbjct: 555 LEDDKNVKRRPLNSK 569 >AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical protein C08F1.11 protein. Length = 279 Score = 27.9 bits (59), Expect = 3.7 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQG 187 KA + G D P+A F I+G ++G Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68 >AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical protein W03G1.5 protein. Length = 471 Score = 27.5 bits (58), Expect = 4.8 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYH 288 G P PG HGRHG+ R G R+ P P R +H Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHG-HGGRHGPPHCPGRHGHH 397 >Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical protein C17G1.4b protein. Length = 844 Score = 27.1 bits (57), Expect = 6.4 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 273 G PS PG G HGT G L +Q++ H +PH Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404 >Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical protein C17G1.4a protein. Length = 925 Score = 27.1 bits (57), Expect = 6.4 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 273 G PS PG G HGT G L +Q++ H +PH Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404 >U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein 111 protein. Length = 332 Score = 27.1 bits (57), Expect = 6.4 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHP 261 GS PG HGR G G+ + P YP P Sbjct: 193 GSKGAPGTHGRQGMPGVRYQLGEPGPAGYPGP 224 >Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical protein F56A12.1 protein. Length = 335 Score = 26.6 bits (56), Expect = 8.4 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +2 Query: 293 NWDDMEKIWHHTFYNE--LRVAPEEHPV 370 +++D++ IWHH Y E L+ E +PV Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199 >Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical protein D2030.9b protein. Length = 530 Score = 26.6 bits (56), Expect = 8.4 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +2 Query: 266 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 367 +P E+ I+++ WD + +W E +AP +HP Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486 >Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical protein D2030.9a protein. Length = 571 Score = 26.6 bits (56), Expect = 8.4 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +2 Query: 266 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 367 +P E+ I+++ WD + +W E +AP +HP Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527 >U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein 140, isoform a protein. Length = 289 Score = 26.6 bits (56), Expect = 8.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 166 GSPSPPGCHGRHGTEGL 216 G P PPG G++GT G+ Sbjct: 250 GRPGPPGAPGKNGTPGV 266 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,210,775 Number of Sequences: 27780 Number of extensions: 219699 Number of successful extensions: 1423 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 885 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1406 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 799252350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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