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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H10
         (453 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   287   3e-78
Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   285   1e-77
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   285   1e-77
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       285   1e-77
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       285   1e-77
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       285   1e-77
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       285   1e-77
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   285   1e-77
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   274   2e-74
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   246   6e-66
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   192   1e-49
J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein ( C.ele...   188   2e-48
J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein ( C.ele...   186   5e-48
J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein ( C.ele...   186   5e-48
J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein ( C.ele...   182   8e-47
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...   159   1e-39
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...   125   1e-29
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...   107   5e-24
AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical ...    74   4e-14
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    50   1e-06
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    50   1e-06
AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical...    31   0.39 
AF067616-11|AAC19194.2|  627|Caenorhabditis elegans Collagen pro...    30   0.69 
Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical pr...    30   0.91 
AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr prote...    30   0.91 
Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AL023837-1|CAA19499.1|  718|Caenorhabditis elegans Hypothetical ...    28   3.7  
AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical ...    28   3.7  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    27   4.8  
Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    27   6.4  
U70849-7|AAF99925.2|  332|Caenorhabditis elegans Collagen protei...    27   6.4  
Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z73906-10|CAB54209.1|  530|Caenorhabditis elegans Hypothetical p...    27   8.4  
Z73906-9|CAA98121.1|  571|Caenorhabditis elegans Hypothetical pr...    27   8.4  
U55373-5|AAC25888.1|  289|Caenorhabditis elegans Collagen protei...    27   8.4  

>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  287 bits (703), Expect = 3e-78
 Identities = 129/131 (98%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 127/131 (96%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  285 bits (699), Expect = 1e-77
 Identities = 128/131 (97%), Positives = 131/131 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 419 TQIMFETFNSP 451
           TQIMFETFN+P
Sbjct: 121 TQIMFETFNTP 131


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  274 bits (672), Expect = 2e-74
 Identities = 121/129 (93%), Positives = 129/129 (100%)
 Frame = +2

Query: 65  DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
           ++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 245 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 424
           RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121

Query: 425 IMFETFNSP 451
           IMFETFN+P
Sbjct: 122 IMFETFNTP 130


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  246 bits (602), Expect = 6e-66
 Identities = 110/113 (97%), Positives = 113/113 (100%)
 Frame = +2

Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 292
           +AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5   RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64

Query: 293 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 451
           NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 65  NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 117


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  192 bits (467), Expect = 1e-49
 Identities = 85/87 (97%), Positives = 87/87 (100%)
 Frame = +2

Query: 191 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 370
           MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1   MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60

Query: 371 LLTEAPLNPKANREKMTQIMFETFNSP 451
           LLTEAPLNPKANREKMTQIMFETFN+P
Sbjct: 61  LLTEAPLNPKANREKMTQIMFETFNTP 87


>J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene IV, 5' end. ).
          Length = 86

 Score =  188 bits (458), Expect = 2e-48
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene III, 5' end. ).
          Length = 86

 Score =  186 bits (454), Expect = 5e-48
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene I, 5' end. ).
          Length = 86

 Score =  186 bits (454), Expect = 5e-48
 Identities = 84/86 (97%), Positives = 86/86 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDMEKI 316
           SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene II, 5' end. ).
          Length = 83

 Score =  182 bits (444), Expect = 8e-47
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 239 SKRGILTLKYPIEHGIITNWDDM 307
           SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDM 83


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score =  159 bits (385), Expect = 1e-39
 Identities = 71/133 (53%), Positives = 97/133 (72%), Gaps = 4/133 (3%)
 Frame = +2

Query: 65  DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 235
           D DV A   +V+DNGSG+ KAGFAG+  P+  F + VGRP++  VM G    D ++G +A
Sbjct: 2   DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61

Query: 236 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 412
           +S RG+ +++YP+EHGI+ NW DMEKIW + F  ++L++ PEEHPVLLT+APLNP  NRE
Sbjct: 62  ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121

Query: 413 KMTQIMFETFNSP 451
           +  +I FETFN P
Sbjct: 122 RSAEIFFETFNVP 134


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score =  125 bits (302), Expect = 1e-29
 Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
 Frame = +2

Query: 83  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 256
           +VVDNG+G  K G+AG + P  +FPS+VGRP  +    VG  + KD  VG+E    R +L
Sbjct: 9   IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68

Query: 257 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
            + YP+++GI+ NWDDM  +W HTF  E L + P+E  +LLTE PLNP +NREKM Q+MF
Sbjct: 69  DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128

Query: 434 ETF 442
           E +
Sbjct: 129 EQY 131


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score =  107 bits (256), Expect = 5e-24
 Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
 Frame = +2

Query: 59  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 202
           M    + A V+DNG+G  K G+AG+  P+ + PS       V     Q       V  G+
Sbjct: 1   MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60

Query: 203 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379
              D ++GDEA S      T+KYPI HGI+ +WD ME+ W    +  LR  PE+H  LLT
Sbjct: 61  DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120

Query: 380 EAPLNPKANREKMTQIMFETFNSP 451
           E PLN   NRE   +IMFE+FN P
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVP 144


>AC006833-3|AAF60947.2|  436|Caenorhabditis elegans Hypothetical
           protein ZK616.4 protein.
          Length = 436

 Score = 74.1 bits (174), Expect = 4e-14
 Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
 Frame = +2

Query: 68  DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 241
           D+V+ LV D GS   + GFAG++ P+   PS +             Q+    GD +  Q+
Sbjct: 9   DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68

Query: 242 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 376
           KR      G   +  P         ++ G+I +W+  EKI  H++ N L   P EHPVL 
Sbjct: 69  KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128

Query: 377 TEAPLNPKANREKMTQIMFETFNSP 451
           +E+  N +A REK+T+IMFE F  P
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVP 153


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%)
 Frame = +2

Query: 74  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
           +  ++ DNG    K G    ++PR V  SIV + +H+   V +  +     +E   K  +
Sbjct: 3   LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57

Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
             ++ PIE G + NWD  ++IW  TF   + V      + LT+      A  +  ++I+F
Sbjct: 58  FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115

Query: 434 ETF 442
           + F
Sbjct: 116 DYF 118


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 58/123 (47%)
 Frame = +2

Query: 74  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
           +  ++ DNG    K G    ++PR V  SIV + +H+   V +  +     +E   K  +
Sbjct: 3   LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57

Query: 254 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
             ++ PIE G + NWD  ++IW  TF   + V      + LT+      A  +  ++I+F
Sbjct: 58  FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115

Query: 434 ETF 442
           + F
Sbjct: 116 DYF 118


>AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical
           protein F59E12.1 protein.
          Length = 811

 Score = 31.1 bits (67), Expect = 0.39
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 204 PMPTMTPWWRGRPTMDGKTARGASSPAKPALHMPEPL 94
           P  T TP  RGRP +    ++    P  P    P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372


>AF067616-11|AAC19194.2|  627|Caenorhabditis elegans Collagen
           protein 99 protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 0.69
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQER-YPHPEVP 270
           G P P G  G HGTEG   +  GPE  + YP P  P
Sbjct: 510 GPPGPMGLRGPHGTEGETGK-QGPEGSKGYPGPMGP 544


>Z48045-2|CAA88100.2|  967|Caenorhabditis elegans Hypothetical
           protein C41C4.4 protein.
          Length = 967

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 187 TLVARATHDGREDGARRVVTGETGFAHAGA 98
           T+V R T DGRE   +RVV+    FAH  A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560


>AF435952-1|AAL30828.1|  967|Caenorhabditis elegans Ser/Thr protein
           kinase protein.
          Length = 967

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 187 TLVARATHDGREDGARRVVTGETGFAHAGA 98
           T+V R T DGRE   +RVV+    FAH  A
Sbjct: 531 TVVYRGTFDGREVAVKRVVSEFVKFAHREA 560


>Z70681-1|CAA94580.1|  307|Caenorhabditis elegans Hypothetical
           protein C30F2.1 protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGL 216
           G P PPGC G  G  GL
Sbjct: 112 GPPGPPGCRGEPGPSGL 128


>AL023837-1|CAA19499.1|  718|Caenorhabditis elegans Hypothetical
           protein Y37H2C.1 protein.
          Length = 718

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/75 (22%), Positives = 28/75 (37%)
 Frame = +2

Query: 41  TKTHAKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 220
           +K H     D    L++     +C  GF G  A +  +    G   HQ +   +  +   
Sbjct: 495 SKRHGMFVVDSSLRLIIKIVFSICSIGFTGYFAYKYFYERPSGLQSHQWICTPLSSQQKV 554

Query: 221 VGDEAQSKRGILTLK 265
           + D+   KR  L  K
Sbjct: 555 LEDDKNVKRRPLNSK 569


>AF025453-5|AAY55851.1|  279|Caenorhabditis elegans Hypothetical
           protein C08F1.11 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQG 187
           KA + G D P+A F  I+G   ++G
Sbjct: 44  KASYLGHDTPQATFREIIGNKEYRG 68


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHPEVPHRTRYH 288
           G P  PG HGRHG+     R  G    R+  P  P R  +H
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHG-HGGRHGPPHCPGRHGHH 397


>Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical
           protein C17G1.4b protein.
          Length = 844

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 273
           G PS PG  G HGT G    L      +Q++  H  +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGL---LRR**GPEQERYPHPEVPH 273
           G PS PG  G HGT G    L      +Q++  H  +PH
Sbjct: 366 GQPSTPGTPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPH 404


>U70849-7|AAF99925.2|  332|Caenorhabditis elegans Collagen protein
           111 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGLLRR**GPEQERYPHP 261
           GS   PG HGR G  G+  +   P    YP P
Sbjct: 193 GSKGAPGTHGRQGMPGVRYQLGEPGPAGYPGP 224


>Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical
           protein F56A12.1 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +2

Query: 293 NWDDMEKIWHHTFYNE--LRVAPEEHPV 370
           +++D++ IWHH  Y E  L+   E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199


>Z73906-10|CAB54209.1|  530|Caenorhabditis elegans Hypothetical
           protein D2030.9b protein.
          Length = 530

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 266 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 367
           +P E+ I+++ WD +  +W      E  +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486


>Z73906-9|CAA98121.1|  571|Caenorhabditis elegans Hypothetical
           protein D2030.9a protein.
          Length = 571

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 266 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 367
           +P E+ I+++ WD +  +W      E  +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527


>U55373-5|AAC25888.1|  289|Caenorhabditis elegans Collagen protein
           140, isoform a protein.
          Length = 289

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 166 GSPSPPGCHGRHGTEGL 216
           G P PPG  G++GT G+
Sbjct: 250 GRPGPPGAPGKNGTPGV 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,210,775
Number of Sequences: 27780
Number of extensions: 219699
Number of successful extensions: 1423
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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