Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H08
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   1.8  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   1.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   7.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    20   9.8  

>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 76  YQTQYTHFLK 47
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 76  YQTQYTHFLK 47
           YQTQY H+L+
Sbjct: 111 YQTQYAHYLE 120


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPC 81
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPC 81
           H  + P ++H+   P + P   P C
Sbjct: 368 HHDMLPETMHMGMGPSLTPLASPGC 392


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 206 EPGELREAARTFEEARGKIKKYT 274
           E  + +E  R   E+RG + K+T
Sbjct: 256 EAPQRKELLRFASESRGSVAKFT 278


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 76  YQTQYTHFLKIY 41
           Y T+Y H LKI+
Sbjct: 294 YATKYCHSLKIH 305


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 76 YQTQYTHFLKIY 41
          Y T+Y H LKI+
Sbjct: 52 YATKYCHSLKIH 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,002
Number of Sequences: 336
Number of extensions: 1425
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)