Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H08
         (388 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   6.8  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   9.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   9.0  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 27  RITSE*ILRKCVYCVWYYAWW*LAGLHQGRRMKMKGN 137
           ++ S  +  +C++ +W ++   LA  HQ  R  ++ N
Sbjct: 60  KLASRSMSLRCIFELWAHSNEGLANFHQALRQHIETN 96


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 52  ENACIVFGIMHGGSL 96
           +  CIV  IMHGG +
Sbjct: 496 DGRCIVARIMHGGMI 510


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 194  NVKFEPGELREAARTFEEARGKI 262
            +++F P  +  AA  +E ARG +
Sbjct: 1478 HIRFSPLSMPFAANIYEPARGSV 1500


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,778
Number of Sequences: 2352
Number of extensions: 5684
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)