Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H07
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11669-1|AAA36729.1| 455|Homo sapiens tetracycline transporter-... 67 4e-11
BC014979-1|AAH14979.1| 455|Homo sapiens tetracycline transporte... 67 4e-11
BC001502-1|AAH01502.1| 455|Homo sapiens tetracycline transporte... 67 4e-11
AL390065-4|CAM21300.1| 455|Homo sapiens tetracycline transporte... 67 4e-11
BC106062-1|AAI06063.1| 485|Homo sapiens HIATL1 protein protein. 36 0.089
BC005058-1|AAH05058.1| 85|Homo sapiens HIATL2 protein protein. 36 0.089
AL691447-7|CAI13281.1| 506|Homo sapiens hippocampus abundant tr... 36 0.089
AL445670-1|CAI15052.1| 134|Homo sapiens hippocampus abundant ge... 36 0.089
AL358232-2|CAI15197.1| 506|Homo sapiens hippocampus abundant tr... 36 0.089
AL158827-2|CAH72564.1| 134|Homo sapiens hippocampus abundant ge... 36 0.089
AK057172-1|BAB71375.1| 490|Homo sapiens protein ( Homo sapiens ... 33 0.63
AF427492-1|AAL25115.1| 490|Homo sapiens putative tetracycline t... 33 0.63
U30255-1|AAA75302.1| 483|Homo sapiens phosphogluconate dehydrog... 30 4.4
BC000368-1|AAH00368.1| 483|Homo sapiens phosphogluconate dehydr... 30 4.4
AL139424-1|CAI95751.1| 483|Homo sapiens phosphogluconate dehydr... 30 4.4
>L11669-1|AAA36729.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 66.9 bits (156), Expect = 4e-11
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 293 TMILPLLPSLLDYYNREEGKGNTLYASLLRAVQGFQQLTGAP--DRFASVLYGGALGSLY 466
T++LPLLP LL+ + R + LY S V F G P R+ SVL+GG +GS +
Sbjct: 40 TLLLPLLPGLLESHGRAH---DPLYGSWQGGVDWFATAIGMPVEKRYNSVLFGGLIGSAF 96
Query: 467 SFLQFLTSPIMGSLSDAYGRKP 532
S LQFL +P+ G+ SD GR+P
Sbjct: 97 SVLQFLCAPLTGATSDCLGRRP 118
>BC014979-1|AAH14979.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 66.9 bits (156), Expect = 4e-11
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 293 TMILPLLPSLLDYYNREEGKGNTLYASLLRAVQGFQQLTGAP--DRFASVLYGGALGSLY 466
T++LPLLP LL+ + R + LY S V F G P R+ SVL+GG +GS +
Sbjct: 40 TLLLPLLPGLLESHGRAH---DPLYGSWQGGVDWFATAIGMPVEKRYNSVLFGGLIGSAF 96
Query: 467 SFLQFLTSPIMGSLSDAYGRKP 532
S LQFL +P+ G+ SD GR+P
Sbjct: 97 SVLQFLCAPLTGATSDCLGRRP 118
>BC001502-1|AAH01502.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 66.9 bits (156), Expect = 4e-11
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 293 TMILPLLPSLLDYYNREEGKGNTLYASLLRAVQGFQQLTGAP--DRFASVLYGGALGSLY 466
T++LPLLP LL+ + R + LY S V F G P R+ SVL+GG +GS +
Sbjct: 40 TLLLPLLPGLLESHGRAH---DPLYGSWQGGVDWFATAIGMPVEKRYNSVLFGGLIGSAF 96
Query: 467 SFLQFLTSPIMGSLSDAYGRKP 532
S LQFL +P+ G+ SD GR+P
Sbjct: 97 SVLQFLCAPLTGATSDCLGRRP 118
>AL390065-4|CAM21300.1| 455|Homo sapiens tetracycline
transporter-like protein protein.
Length = 455
Score = 66.9 bits (156), Expect = 4e-11
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 293 TMILPLLPSLLDYYNREEGKGNTLYASLLRAVQGFQQLTGAP--DRFASVLYGGALGSLY 466
T++LPLLP LL+ + R + LY S V F G P R+ SVL+GG +GS +
Sbjct: 40 TLLLPLLPGLLESHGRAH---DPLYGSWQGGVDWFATAIGMPVEKRYNSVLFGGLIGSAF 96
Query: 467 SFLQFLTSPIMGSLSDAYGRKP 532
S LQFL +P+ G+ SD GR+P
Sbjct: 97 SVLQFLCAPLTGATSDCLGRRP 118
>BC106062-1|AAI06063.1| 485|Homo sapiens HIATL1 protein protein.
Length = 485
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 59 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 90
>BC005058-1|AAH05058.1| 85|Homo sapiens HIATL2 protein protein.
Length = 85
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 15 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 46
>AL691447-7|CAI13281.1| 506|Homo sapiens hippocampus abundant
transcript-like 1 protein.
Length = 506
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 80 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 111
>AL445670-1|CAI15052.1| 134|Homo sapiens hippocampus abundant gene
transcript-like 2 protein.
Length = 134
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 80 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 111
>AL358232-2|CAI15197.1| 506|Homo sapiens hippocampus abundant
transcript-like 1 protein.
Length = 506
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 80 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 111
>AL158827-2|CAH72564.1| 134|Homo sapiens hippocampus abundant gene
transcript-like 2 protein.
Length = 134
Score = 35.9 bits (79), Expect = 0.089
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
L G + + L FL++P++G+LSD +GRKP
Sbjct: 80 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRKP 111
>AK057172-1|BAB71375.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ32610 fis, clone STOMA2000055, highly similar to
Mouse mRNA for tetracycline transporter-like protein. ).
Length = 490
Score = 33.1 bits (72), Expect = 0.63
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRK 529
L G + + L FL++P++G+LSD +GRK
Sbjct: 72 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRK 102
>AF427492-1|AAL25115.1| 490|Homo sapiens putative tetracycline
transporter-like protein protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.63
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 437 LYGGALGSLYSFLQFLTSPIMGSLSDAYGRK 529
L G + + L FL++P++G+LSD +GRK
Sbjct: 72 LMNGLIQGVKGLLSFLSAPLIGALSDVWGRK 102
>U30255-1|AAA75302.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 362 LYAS-LLRAVQGFQQLTGAPDRFASVLYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
LYAS ++ QGF L A F L G + ++ + S +G + DA+ R P
Sbjct: 327 LYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNP 384
>BC000368-1|AAH00368.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 362 LYAS-LLRAVQGFQQLTGAPDRFASVLYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
LYAS ++ QGF L A F L G + ++ + S +G + DA+ R P
Sbjct: 327 LYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNP 384
>AL139424-1|CAI95751.1| 483|Homo sapiens phosphogluconate
dehydrogenase protein.
Length = 483
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 362 LYAS-LLRAVQGFQQLTGAPDRFASVLYGGALGSLYSFLQFLTSPIMGSLSDAYGRKP 532
LYAS ++ QGF L A F L G + ++ + S +G + DA+ R P
Sbjct: 327 LYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNP 384
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,798,642
Number of Sequences: 237096
Number of extensions: 1261086
Number of successful extensions: 2287
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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