Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H06
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 181 2e-44
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 171 1e-41
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 167 2e-40
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 158 9e-38
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 154 2e-36
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 146 4e-34
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 138 1e-31
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 130 4e-29
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 122 1e-26
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 120 4e-26
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 118 1e-25
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 116 5e-25
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 112 8e-24
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 110 2e-23
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 107 2e-22
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 106 4e-22
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 91 3e-17
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 71 2e-11
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 68 2e-10
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 5e-10
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 64 2e-09
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 61 2e-08
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 60 5e-08
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 59 8e-08
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 59 1e-07
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 58 2e-07
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 55 1e-06
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 55 2e-06
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 54 3e-06
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 52 9e-06
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 50 4e-05
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 3e-04
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 46 6e-04
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 46 8e-04
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 43 0.006
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 41 0.022
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 38 0.21
UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30; ... 38 0.21
UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein; ... 35 2.0
UniRef50_UPI00006CBDD5 Cluster: hypothetical protein TTHERM_0031... 34 3.4
UniRef50_A3ITP2 Cluster: Efflux transporter, RND family, MFP sub... 34 3.4
UniRef50_Q6UWW8 Cluster: Carboxylesterase 3 precursor; n=17; Eut... 34 3.4
UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole... 33 4.5
UniRef50_Q54SS9 Cluster: Actin-binding protein; n=2; Dictyosteli... 33 4.5
UniRef50_Q2H2D1 Cluster: Predicted protein; n=1; Chaetomium glob... 33 4.5
UniRef50_Q88VI5 Cluster: Putative uncharacterized protein lp_206... 33 6.0
UniRef50_Q9SH73 Cluster: F22C12.1; n=6; Arabidopsis thaliana|Rep... 33 6.0
UniRef50_A6RVB3 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 6.0
UniRef50_Q6G2C9 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 181 bits (440), Expect = 2e-44
Identities = 85/125 (68%), Positives = 106/125 (84%)
Frame = +1
Query: 19 GIRHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 198
G +FFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL ML I PF+YGL +
Sbjct: 131 GPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIV 190
Query: 199 QVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLA 378
QVYDSG++FAP+ILDI +DL ++F++G+ANVAA+SL IGYPTVAS PHSI NGFKNLLA
Sbjct: 191 QVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLA 250
Query: 379 IAAVT 393
+A T
Sbjct: 251 VAVAT 255
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +2
Query: 395 EVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLF 574
++ FKEA K ++ DPS F ESDDDMGFGLF
Sbjct: 256 DITFKEAEQAKAFVADPSAFAALVPAAQEDKKEDDKAAAAAEESE---EESDDDMGFGLF 312
Query: 575 D 577
D
Sbjct: 313 D 313
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 171 bits (416), Expect = 1e-41
Identities = 80/125 (64%), Positives = 101/125 (80%)
Frame = +1
Query: 19 GIRHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 198
G +FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++
Sbjct: 131 GPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQ 190
Query: 199 QVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLA 378
QV+D+G+I+ P +LDI E L +FL GV NVA++ L IGYPTVAS PHSI NG+K +LA
Sbjct: 191 QVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLA 250
Query: 379 IAAVT 393
++ T
Sbjct: 251 LSVET 255
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 167 bits (407), Expect = 2e-40
Identities = 77/128 (60%), Positives = 103/128 (80%), Gaps = 3/128 (2%)
Frame = +1
Query: 19 GIRHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN---ISPFSYGL 189
G +FFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATLLNMLN ISPFSYGL
Sbjct: 131 GPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGL 190
Query: 190 VVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKN 369
+++QVYD+G++++P +LDI + L ++FL GV N+A++ L IGYPT+AS PH+I NG+K
Sbjct: 191 IIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKR 250
Query: 370 LLAIAAVT 393
+LA+ T
Sbjct: 251 VLAVTVET 258
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +2
Query: 404 FKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLFD 577
F A +K Y+ DP+ F ESD+DMGFGLFD
Sbjct: 262 FPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 158 bits (384), Expect = 9e-38
Identities = 75/131 (57%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YGLVV+ VYD+G++F P +L++ +DL EKF AGV+ + ALSL+I YPTVA+APH N
Sbjct: 188 YGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNA 247
Query: 361 FKNLLAIAAVT 393
+KN+LA+A T
Sbjct: 248 YKNVLAVALAT 258
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 154 bits (373), Expect = 2e-36
Identities = 71/131 (54%), Positives = 97/131 (74%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PFS
Sbjct: 127 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YGLVV+ VYD+G++F+P +LD+ + L EKF +G++ V +L+L++ YPT+A+APH N
Sbjct: 187 YGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINA 246
Query: 361 FKNLLAIAAVT 393
+KN LAIA T
Sbjct: 247 YKNALAIAVAT 257
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2
Query: 404 FKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDD---DMGFGLF 574
F +A +KE++KDPSKFV ESD+ + GFGLF
Sbjct: 261 FPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLF 320
Query: 575 D 577
D
Sbjct: 321 D 321
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 146 bits (354), Expect = 4e-34
Identities = 71/120 (59%), Positives = 90/120 (75%)
Frame = +1
Query: 34 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 213
+F Q L I TKI++G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+
Sbjct: 135 SFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDA 194
Query: 214 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVT 393
G ++P+I + EDL KF G+ N+AA+SL IGYPTVAS PHS+ N FKNLLAI+ T
Sbjct: 195 GACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFET 251
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 138 bits (333), Expect = 1e-31
Identities = 67/130 (51%), Positives = 93/130 (71%), Gaps = 2/130 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQAL I TKI KG I+I+N++H++ KVG SEA LL L + PFS
Sbjct: 135 PGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFS 194
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
+GL VK VYD+G++++ +L + + L KF+ GV N+AA+SL++G PT ASAPHSI +G
Sbjct: 195 FGLKVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSG 254
Query: 361 FKNLLAIAAV 390
FKNL++IA V
Sbjct: 255 FKNLVSIAHV 264
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 130 bits (313), Expect = 4e-29
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
Frame = +1
Query: 10 GAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 183
G G+ + AFFQ L+IPTKI+K IEI D I+ G+KVG++EA LL LNI+PFSY
Sbjct: 144 GGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSY 203
Query: 184 GLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGF 363
L V V+D+G ++ P +LDI E + E + ++NVA++SL G PT ASAPHSI F
Sbjct: 204 KLSVAHVFDNGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVF 263
Query: 364 KNLLAI 381
KNLLA+
Sbjct: 264 KNLLAV 269
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 122 bits (293), Expect = 1e-26
Identities = 64/127 (50%), Positives = 83/127 (65%), Gaps = 2/127 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ H +F ++L I TKI KG IEI VH++K G+KV AS ATLL N++P S
Sbjct: 126 PGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-S 184
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YG+ V+ VYD G I+ +LDI ED+ EKF GV+NVAALS + G T AS PH
Sbjct: 185 YGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEA 244
Query: 361 FKNLLAI 381
FKN++A+
Sbjct: 245 FKNIVAL 251
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 120 bits (288), Expect = 4e-26
Identities = 71/116 (61%), Positives = 80/116 (68%)
Frame = +1
Query: 46 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 225
ALSIP KISKGTIEIINDV ILK GDK+ +QVY G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI----------------------EQVY--GSIF 773
Query: 226 APAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVT 393
+P ILDIKPEDLR KF GVAN+A +SL IGYPT+AS PH+IA GF+NLL IAAVT
Sbjct: 774 SPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLLVIAAVT 829
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 118 bits (284), Expect = 1e-25
Identities = 57/113 (50%), Positives = 77/113 (68%)
Frame = +1
Query: 46 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIF 225
AL+I KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++
Sbjct: 142 ALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMY 201
Query: 226 APAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
P+IL I E L EKF G+ NV L+L++GYP ASAPH + + FK++ AIA
Sbjct: 202 DPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDIAAIA 254
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 116 bits (279), Expect = 5e-25
Identities = 58/120 (48%), Positives = 79/120 (65%)
Frame = +1
Query: 34 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 213
+FFQAL+I TKI+KGT+EI++D +L GD+V S ATLL L+ISPF Y + V+ V+D
Sbjct: 143 SFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDR 202
Query: 214 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVT 393
G +F L I + + + L G++NVAALSL G PT A+ PH I + FK LL + T
Sbjct: 203 GMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVAT 262
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 112 bits (269), Expect = 8e-24
Identities = 52/117 (44%), Positives = 77/117 (65%)
Frame = +1
Query: 34 AFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 213
++FQAL I TKI+KG +EII+ +L GDKVG S+A LL MLNI PF Y + + Q+Y+
Sbjct: 158 SYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYED 217
Query: 214 GTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
G I+ +++DI ED+ ++ VAA SL G T AS P+++ N FK++L ++
Sbjct: 218 GVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDILHVS 274
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 110 bits (265), Expect = 2e-23
Identities = 58/131 (44%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGIRHEA--FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ FF ALSI TKI KG IEI +V + G K+G SE +LL +NI PFS
Sbjct: 143 PGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFS 202
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YG+ YD+G I +L I P + + F +AA+SL+ GY T S PH I N
Sbjct: 203 YGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNA 262
Query: 361 FKNLLAIAAVT 393
FK+L AI T
Sbjct: 263 FKDLAAIGMET 273
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 107 bits (257), Expect = 2e-22
Identities = 51/116 (43%), Positives = 74/116 (63%)
Frame = +1
Query: 37 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSG 216
F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G
Sbjct: 144 FVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNG 203
Query: 217 TIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
++ LD+ D+ +KF GV A+SL+ PT A+ PH + N F+ LL +
Sbjct: 204 IVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALLGFS 259
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 106 bits (255), Expect = 4e-22
Identities = 58/127 (45%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Frame = +1
Query: 7 PGAAGIRHEA--FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ + FF AL IPTKI KG I+I D +LK G KVG S+A LL L PF
Sbjct: 143 PGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFL 202
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YG+ V YD+G+I + + D+ KF V NV+A+SL G+ ASAP+ +AN
Sbjct: 203 YGMEVLACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANA 262
Query: 361 FKNLLAI 381
FK+L AI
Sbjct: 263 FKDLAAI 269
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 90.6 bits (215), Expect = 3e-17
Identities = 45/120 (37%), Positives = 68/120 (56%)
Frame = +1
Query: 16 AGIRHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 195
+G F+ AL I TKI+KG IEI+N V+++K GD V S ATLL L I PF Y +
Sbjct: 131 SGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSA 190
Query: 196 KQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLL 375
+YD G I+ A+L+I + K+ AG+ +L+L +P + + PH + K+ +
Sbjct: 191 LNLYDDGEIYDAAVLEIDDSVMEAKWNAGLEAFVSLALGANFPCLPAIPHIFMDTAKSFI 250
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/114 (32%), Positives = 56/114 (49%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
QAL IP +I KG + I D +LK G+ + A +LN L I P GL V VY+ G +
Sbjct: 141 QALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIV 200
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
+ P +L I ++ + + L+++I YPT + I F N +A
Sbjct: 201 YTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFLNAKTVA 254
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/88 (37%), Positives = 54/88 (61%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF + + Y++G
Sbjct: 137 FQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGK 196
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAAL 303
+ P++L+ + F ++++ +L
Sbjct: 197 SYDPSVLNFNESMFDKSFKDCLSSIESL 224
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/116 (29%), Positives = 52/116 (44%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F L + TK+ G + ++ D + KPGD + A +L L I P L +K Y G
Sbjct: 143 FGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAYHEGL 202
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAA 387
+ L + E R N L++ I YPT +I+ FKN +A+A+
Sbjct: 203 VIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAIALAS 258
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/106 (29%), Positives = 57/106 (53%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
Q + +I +G+I++++D + + G+ V + +L+ L I P GL ++ V+ G +
Sbjct: 143 QTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVL 202
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
F P L+I ++ R + A+ LS++ YPT +AP IA G
Sbjct: 203 FTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/116 (32%), Positives = 61/116 (52%)
Frame = -3
Query: 384 SDGEQVLETVXXXXXXXXXXXXXXXXXXRGHVGHSSKELLAKVLRLDVENCRREDGTGVV 205
SD +QVL V + S E+ + + D+++ ED T VV
Sbjct: 75 SDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVRDQFIVSDIQDGSWEDLTVVV 134
Query: 204 HLFDNKTIRKGRDVQHVEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEE 37
+L D +T+ + R+VQ V++ SFRS+ +T + D+++ DNFN T NL + +SLEE
Sbjct: 135 NLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEE 190
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 37 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDS 213
FFQAL IPT+ISK +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S
Sbjct: 132 FFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSS 190
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 59.3 bits (137), Expect = 8e-08
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY-DSG 216
F L I T + GTI I D + KPGD + A+LL L I+P + +K Y S
Sbjct: 148 FGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSL 207
Query: 217 TIFAPA---ILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
+ PA +LD+ +E+ N AL +SI YP S+A F++ L +A
Sbjct: 208 NRWVPAEELVLDL--NKYKEQIQEAYTNALALGVSIAYPVPEVLKLSVAKAFQDALKVA 264
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/116 (26%), Positives = 54/116 (46%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F L IPT++ +G+I I D + KPGD + A LL+ L + P L +K +Y G
Sbjct: 144 FNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKLQIKTIYLDGK 203
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAA 387
+ +P +++ + + ++ L+ + P P IA LA+A+
Sbjct: 204 VVSPKDVELDVSLWKNRLVSAHTEAYNLAFNAALPLPQVLPQLIAKAHIEALALAS 259
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/107 (28%), Positives = 49/107 (45%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
Q+ IP I G + + + K G+ V AT+L+ L I P GL ++ YD GTI
Sbjct: 142 QSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTI 201
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGF 363
+ P +L + + N LS++ YPT A+ +A +
Sbjct: 202 YEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/115 (26%), Positives = 55/115 (47%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F+ IPTKI +GTI I+ D +K G+ +G A LL L+I P + ++ + G
Sbjct: 125 FKEAGIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGV 184
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
I++ L + E +R F +LS+ Y T + +A ++ +++
Sbjct: 185 IYSREDLAVDVEAIRAGFAQAHQEALSLSVEAAYVTPENVGQVLARAAQHARSLS 239
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/116 (28%), Positives = 52/116 (44%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F L IPT+I +I I D + KPGD + A+LL L+I+ + +K YD G
Sbjct: 142 FSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGI 201
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAA 387
I L + E+ + + + + I +P S+ F+ LA+AA
Sbjct: 202 IILRDQLVLDLEEYKNMVMNAHLDALKIGSEIAWPVPEILELSLNKAFRQALALAA 257
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
Q + IP KI KG+I + +D I+ G+++ + A +L L I P G+ + V + TI
Sbjct: 136 QQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGIDLLAVCEGDTI 195
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
+ +L I E+ + + LS+ G SAP I ++ L +A
Sbjct: 196 YTADVLAIDEEETIQTLANAYQSAINLSVYAGILNSESAPLLIQKAARDALNLA 249
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 52.4 bits (120), Expect = 9e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +1
Query: 283 VANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAVT 393
V NVA++ L IGYPTVAS PHSI NG+K +LA++ T
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVET 37
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/115 (25%), Positives = 53/115 (46%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F+ IPTKI +GTI I D + G+ + A +L L+I P G+ + + G
Sbjct: 139 FKEAGIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGITLFTALEDGL 198
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
+A + I E +R++F +LS+ Y T + +A ++ +++
Sbjct: 199 KYAEEEMIIDVEKVRDEFAQAHQEAISLSIEAAYVTPENIEQILAKAAQSARSVS 253
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/114 (23%), Positives = 49/114 (42%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
Q +P +I G + I D ++K G+++ A +L L I P G+ + + GT+
Sbjct: 152 QQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAIVAEGTL 211
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIA 384
F L I ++ + + LS++ PT +A +A L +A
Sbjct: 212 FERDDLAIDFDEYEDMAKEAAQHAFNLSINAAIPTAETADVIVAKAHTEALNLA 265
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQV 204
F L IPT+I G I + D + KPGD V A LL ++N+ P L VK V
Sbjct: 150 FSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAV 204
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTI 222
Q + IP I G ++I ++K G+ + A L L + P GL+++ Y TI
Sbjct: 139 QQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETI 198
Query: 223 FAPAILDIKPEDLREKFLAGVANVAALSLSIGYPT 327
F P +L I E + LS++ PT
Sbjct: 199 FTPDLLAIDEEVYANNIVLAAQQAFNLSVNAVIPT 233
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 43.2 bits (97), Expect = 0.006
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 1/119 (0%)
Frame = +1
Query: 40 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGT 219
F L I ++ G I I + + KPGD + A LL L I P G+ VK D G
Sbjct: 146 FGKLRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGV 205
Query: 220 IFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHS-IANGFKNLLAIAAVT 393
+ +L E R + L+ I Y V A S I A+AA T
Sbjct: 206 LITEDLLRPDIEAFRGDVIDAAKEALGLATEIVYMPVPEAVESAIVKAALAASALAAET 264
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 41.1 bits (92), Expect = 0.022
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +1
Query: 43 QALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV-----KQVY 207
+AL + TK++ G IEI+ D ++K G+ V A +L L I P + + + Y
Sbjct: 135 RALGVKTKVTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKPIERQVTLIAAKDEVFY 194
Query: 208 DSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPT 327
D + P LD+ E L++ ++ L++ + PT
Sbjct: 195 DKQILNTP--LDLYIEQLKDAYI----KARGLAIELAIPT 228
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1
Query: 230 GAKMVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRI 105
G M+ +Y LT YEKGE +N SEA LSP +RI
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRI 219
>UniRef50_Q9UKD2 Cluster: mRNA turnover protein 4 homolog; n=30;
Metazoa|Rep: mRNA turnover protein 4 homolog - Homo
sapiens (Human)
Length = 239
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +1
Query: 31 EAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 210
E + L +PT + +G + +++D + K GD + +A +L + + + +K ++D
Sbjct: 150 EPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWD 209
Query: 211 SGTIFAPAILDIKPEDLRE 267
S + + D PE E
Sbjct: 210 SQSGRFQQMGDDLPESASE 228
>UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein;
n=4; Rhodobacteraceae|Rep: Secretion protein HlyD family
protein - Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9)
Length = 396
Score = 34.7 bits (76), Expect = 2.0
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Frame = +1
Query: 166 ISPFSYGLVVKQVYDSGT-----IFAPAILDI--KPEDLREKFLAGVANVAALSLSIGYP 324
+ FS GLV + G+ I +PA+L I +PEDL +F AG VA +L +G P
Sbjct: 218 VRSFSDGLVTQLALSVGSPAATLILSPAMLIIPDRPEDLPLRFTAGFNQVARSTLYVGMP 277
Query: 325 TVASAPHSIANGFKNLLAIAAV 390
+ +I F++ + A +
Sbjct: 278 AEIACNTNINLSFRDTVLPARI 299
>UniRef50_UPI00006CBDD5 Cluster: hypothetical protein
TTHERM_00316610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00316610 - Tetrahymena
thermophila SB210
Length = 1366
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -3
Query: 189 KTIRKGRDVQHVEKSSFRSSHLITRLQDMDIIDNFNST-L*NLSGDGKSLEESLVPN 22
++IR +++ E +F+++HL++RL+D+ + NST S D K +E+ L N
Sbjct: 609 QSIRNQESLKNNEGETFQNTHLVSRLKDLIGCQSNNSTQSPKTSSDSKKVEDCLTDN 665
>UniRef50_A3ITP2 Cluster: Efflux transporter, RND family, MFP
subunit; n=1; Cyanothece sp. CCY 0110|Rep: Efflux
transporter, RND family, MFP subunit - Cyanothece sp.
CCY 0110
Length = 602
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +1
Query: 64 KISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILD 243
KI++ ++IND ++ A+ + + + I G+V +++ D G + P +
Sbjct: 268 KIARLEAKVINDQAKVQQAKAKVATASVISSYTQIEAPVTGIVQERIVDPGMVVQPGMGI 327
Query: 244 IKPEDLRE-KFLAGVANVAALSLSIGYPTVASAP 342
+K D + + A VA A + IG P VA P
Sbjct: 328 LKIGDYSQIRLQANVAQHDATKIRIGTPIVAKIP 361
>UniRef50_Q6UWW8 Cluster: Carboxylesterase 3 precursor; n=17;
Eutheria|Rep: Carboxylesterase 3 precursor - Homo
sapiens (Human)
Length = 571
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 130 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSL 309
G++ ++++ L +SP + GL + + SG I P I+D P L +K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACSS 283
Query: 310 S 312
S
Sbjct: 284 S 284
>UniRef50_Q4TAX5 Cluster: Chromosome undetermined SCAF7240, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7240,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 578
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 192 CQTGVRLRYHLRAGNSRHQAGGPSREVPCWSGQRGRALVVHRVPDGRV 335
C GV+ R+ R NSR Q G P + W G R ++ PDG++
Sbjct: 322 CSAGVQDRWFWRLRNSRVQEGYPMQIHHFWKGLPARIDAAYQRPDGKL 369
>UniRef50_Q54SS9 Cluster: Actin-binding protein; n=2; Dictyostelium
discoideum|Rep: Actin-binding protein - Dictyostelium
discoideum AX4
Length = 1214
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 317 GTRRSRLRLIPSRTVSRTCSPSLPSHEVDFKEATTIKEYIKDPS 448
G+ S R++ S S T S S H+ D ++ TIKEYI +PS
Sbjct: 1058 GSPSSSNRILASNESSPTSSTSSVVHQHDDEDEETIKEYINNPS 1101
>UniRef50_Q2H2D1 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 396
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -1
Query: 395 HVTAAMASRFLKPFAM-E*GADATVGYPMDN---ESAATLATPARNFSRRSSGLMSRI 234
H SRF+ P AM + T GY DN +S+ + ATP N +RR SGL+ +
Sbjct: 309 HTGTEQESRFIAPAAMLDCSTMVTDGYAADNASGQSSGSSATPVHNSTRR-SGLLEHV 365
>UniRef50_Q88VI5 Cluster: Putative uncharacterized protein lp_2066;
n=1; Lactobacillus plantarum|Rep: Putative
uncharacterized protein lp_2066 - Lactobacillus
plantarum
Length = 209
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 275 LLEWPTWPRSRCPSGTRRSRLRLIPSRTVSRTCSPSLPSHEVDFKEATT 421
+++ P WP ++ TR++ S + S++ S SL S +V F EA+T
Sbjct: 47 VVKLPYWPYNQSQQSTRKASSSTSTSTSTSKSKSTSLSSSQVVFNEAST 95
>UniRef50_Q9SH73 Cluster: F22C12.1; n=6; Arabidopsis thaliana|Rep:
F22C12.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 3290
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 291 VGHSSKELLAKV-LRLDVENCRREDGTGVVHLFDNKTIRKGRDVQHVEKSSFRS 133
+G SSK + ++L+ E R + GVVHL D+ T+ K HV K S
Sbjct: 1972 LGGSSKRQKTDIHVKLERETDRNSESDGVVHLVDSSTLNKDSISGHVSKPCMSS 2025
>UniRef50_A6RVB3 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 739
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = -1
Query: 302 SAATLATPARNFSRRSSGLM--SRIAGAKMV---PESYTCLTTRPYEKGEMFNMLRRVAS 138
S+ATLA P F+ + G++ +R A AK P T R + +F RVA+
Sbjct: 94 SSATLALPTSQFTMATPGILKAARTANAKSAKAKPADTTVAPLRNFRSARLFLQKSRVAT 153
Query: 137 EAPTLS 120
PT+S
Sbjct: 154 ITPTVS 159
>UniRef50_Q6G2C9 Cluster: Putative uncharacterized protein; n=2;
Bartonella|Rep: Putative uncharacterized protein -
Bartonella henselae (Rochalimaea henselae)
Length = 780
Score = 32.7 bits (71), Expect = 7.9
Identities = 29/123 (23%), Positives = 52/123 (42%)
Frame = +1
Query: 22 IRHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQ 201
IR + + + P T + D I++ K T+ N+ N S + + + +
Sbjct: 185 IRSDMLLKNKTAPGNTEPATFTLNADNSIIEGRVKTFPQNKTVFNLNNNSKWYLKISLFE 244
Query: 202 VYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAI 381
+ D ++F +LDIK R + + V N+ S+ V SAPH + NG L +
Sbjct: 245 MEDDFSLFDYKLLDIKQ---RAQSIVSVLNLHNSSI------VFSAPHKLVNGHYQTLHV 295
Query: 382 AAV 390
+
Sbjct: 296 GKI 298
>UniRef50_Q30U01 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 325
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 338 ADATVGYPMDNESAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTTR 186
A + Y ++NE + L +F+ G +S I GAK++P+ ++T+
Sbjct: 154 ATLNIDYKLNNEILSRLENDISSFTSMQEGKLSLILGAKLIPKIAQAISTK 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,576,119
Number of Sequences: 1657284
Number of extensions: 11222190
Number of successful extensions: 34136
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 33020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34119
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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