Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H06
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVPESYTCLTT 189
           S   L+TP+ + + +SSGL S ++ +   P      TT
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 GLFD*ARVHRNRHVV 610
           GLFD +R HR+R +V
Sbjct: 455 GLFDTSRNHRDRAMV 469



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 139 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKP 252
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 81  STPPLSTPSNSNATKSSGLTSPLSVSTSPP 110


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 302 SAATLATPARNFSRRSSGLMSRIAGAKMVP 213
           S   L+TP+ + + +SSGL S ++ +   P
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPP 154


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 291 VGHSSKELLAKVLRLDVE 238
           V H++ ELL  V  LD+E
Sbjct: 256 VAHTAGELLGAVYSLDLE 273


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 291 VGHSSKELLAKVLRLDVE 238
           V H++ ELL  V  LD+E
Sbjct: 256 VAHTAGELLGAVYSLDLE 273


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 291 VGHSSKELLAKVLRLDVE 238
           V H++ ELL  V  LD+E
Sbjct: 576 VAHTAGELLGAVYSLDLE 593


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 139 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKP 252
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 GLFD*ARVHRNRHVV 610
           GLFD +R HR+R ++
Sbjct: 455 GLFDTSRNHRDRAMI 469


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 139 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKP 252
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 GLFD*ARVHRNRHVV 610
           GLFD +R HR+R ++
Sbjct: 455 GLFDTSRNHRDRAMI 469


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 GLFD*ARVHRNRHVV 610
           GLFD +R HR+R ++
Sbjct: 455 GLFDTSRNHRDRAMI 469


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 139 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKP 252
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 566 GLFD*ARVHRNRHVV 610
           GLFD +R HR+R ++
Sbjct: 455 GLFDTSRNHRDRAMI 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,812
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)