Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H06
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 162 2e-40
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 162 2e-40
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 161 4e-40
03_02_0966 + 12783515-12783901 30 1.4
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 29 2.4
03_02_0935 - 12517564-12517650,12517995-12518060,12518156-125181... 29 2.4
06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137 29 3.2
02_03_0041 + 14275897-14276370 29 3.2
02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 29 4.2
01_06_1676 - 39084928-39085016,39085462-39085555,39085664-390857... 29 4.2
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 4.2
12_02_1270 + 27466516-27466621,27466722-27466885,27467385-274681... 28 5.6
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 28 5.6
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 28 5.6
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 28 5.6
04_04_0095 - 22775340-22776017 28 5.6
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 28 5.6
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 28 5.6
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 28 5.6
04_01_0142 + 1640472-1640611,1641618-1641744,1642233-1642425,164... 28 7.4
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734... 27 9.7
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579... 27 9.7
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 27 9.7
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 27 9.7
03_01_0610 + 4478521-4478715,4480003-4480090,4480255-4480321,448... 27 9.7
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 162 bits (394), Expect = 2e-40
Identities = 75/131 (57%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFS 187
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YGLV+ VYDSG++F+P +LD+ EDL EKF +GV+ VA++SL+I YPT+A+APH NG
Sbjct: 188 YGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNG 247
Query: 361 FKNLLAIAAVT 393
+KN+LA+A T
Sbjct: 248 YKNVLAVAVET 258
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 395 EVDFKEATTIKEYIKDPSKF-VXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGL 571
E + A IKEY+KDPSKF V ESD D+G L
Sbjct: 259 EYSYPHADKIKEYLKDPSKFAVAAPVAAADSGAAAVASSKEEEKKEEPEEESDGDLGMSL 318
Query: 572 FD 577
FD
Sbjct: 319 FD 320
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 162 bits (394), Expect = 2e-40
Identities = 75/131 (57%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFS 187
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YGLV+ VYDSG++F+P +LD+ EDL EKF +GV+ VA++SL+I YPT+A+APH NG
Sbjct: 188 YGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNG 247
Query: 361 FKNLLAIAAVT 393
+KN+LA+A T
Sbjct: 248 YKNVLAVAVET 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 395 EVDFKEATTIKEYIKDPSKF-VXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGL 571
E + A IKEY+KDPSKF V ESD D+G L
Sbjct: 259 EYSYPHADKIKEYLKDPSKFAVAAAVAAADSGAAAPAASKEEEKKEEPEEESDGDLGMSL 318
Query: 572 FD 577
FD
Sbjct: 319 FD 320
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 161 bits (391), Expect = 4e-40
Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 2/131 (1%)
Frame = +1
Query: 7 PGAAGI--RHEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 180
PG G+ +FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I PFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFS 187
Query: 181 YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANG 360
YGLV+ VYDSG++F+P +LD+ +DL EKF +GV+ VA++SL+I YPT+A+APH NG
Sbjct: 188 YGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNG 247
Query: 361 FKNLLAIAAVT 393
+KN+LA+A T
Sbjct: 248 YKNVLAVAVET 258
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = +2
Query: 395 EVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSESDDDMGFGLF 574
E + A IKEY+KDPSKF ESD D+G LF
Sbjct: 259 EYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLF 318
Query: 575 D 577
D
Sbjct: 319 D 319
>03_02_0966 + 12783515-12783901
Length = 128
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +1
Query: 277 AGVANVAALSLSIGYPTVASAPHSIANGFKN-LLAIAA 387
AG+A VAA++ ++ P VA A +++ KN LL+IA+
Sbjct: 67 AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFLLSIAS 104
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 250 PEDLREKFLAGVANVAALSLSIGYPTVASAPHSIANGFKNLLAIAAV 390
PE R F AG A V A +P A+A +S GF+ +A +V
Sbjct: 35 PEKKRASFAAGAAAVRAKVCDARWPASAAAANSAPYGFRGGVATRSV 81
>03_02_0935 -
12517564-12517650,12517995-12518060,12518156-12518185,
12518279-12518377,12518578-12518673,12519221-12519271,
12519358-12519424,12519516-12519610,12519928-12520009,
12520609-12520658,12520741-12520791,12521749-12521832,
12521918-12522028,12522276-12522425,12522858-12522975,
12523118-12523290
Length = 469
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 28 HEAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL 150
H+AF ++ IS ++I ND+ +L G + G E L
Sbjct: 276 HDAFVESSGAVNTISASLMKIANDIRLLGSGPRCGLGELIL 316
>06_01_0464 - 3300356-3300673,3300757-3301244,3301315-3302137
Length = 542
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 112 KPGDKVGASEATLLNMLNISPFS--YGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGV 285
KP D V +S TLL N + FS Y L +++ + A A D +++ EK G+
Sbjct: 423 KPSDVVASSYVTLLQAANYATFSLDYALELEERLRARERDAAAEADAMRKEVEEKAQRGL 482
Query: 286 ANVAALSL 309
A A ++
Sbjct: 483 AAAKAAAV 490
>02_03_0041 + 14275897-14276370
Length = 157
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 338 ADATVGYPMDNESAATLATPARNFSRRSSGLMSRIAGAKMVPE 210
A+ G P+ E AT A RR+SG + +AG +PE
Sbjct: 88 AEEEDGVPVPGEVVATTADAQETRQRRNSGSNATVAGEDALPE 130
>02_05_0190 -
26592452-26592693,26592911-26593004,26593425-26593656,
26594660-26595066
Length = 324
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Frame = -1
Query: 419 WWLP*SRLHVTAAMASRFLKPFAME*GADATVGYPMDNESAATLATPARNFSRRSSGLMS 240
+W P + V AA S PFA D + + E + L+T + S SSG
Sbjct: 118 FWSPPTGDEVRAAFTSIEELPFAFRVFGDPFRAHSYETEEQSALSTSVHSSSGNSSGSDD 177
Query: 239 RIAGAKMVPESYTCLTTRPYEKGEMFNMLRR---VASEAPTLSPGFRIWTSLI 90
I A S LT + F +L++ V +LS +W +++
Sbjct: 178 WIEPAAYALNSTALLTREHRNVLDAFRLLQKDPNVQKMVMSLSCDRAVWDAVM 230
>01_06_1676 -
39084928-39085016,39085462-39085555,39085664-39085750,
39085941-39086073,39086451-39086724,39086863-39086989,
39087095-39087345,39087476-39087575
Length = 384
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 178 SYGLVVKQVYDSGTIFAPAILDIKPEDLREKFLAGVANVAAL 303
SYG V V DSGT A LD + +FL VA V+ L
Sbjct: 83 SYGRVYYAVLDSGTKIAVKKLDSNENEPTSEFLTQVALVSRL 124
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 85 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 237
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>12_02_1270 +
27466516-27466621,27466722-27466885,27467385-27468173,
27468263-27468479,27469078-27469256,27470233-27470474,
27470607-27470994
Length = 694
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 282 SSKELLAKVLRLDVENCRREDGTGVVHLFDNKTIRK 175
+ K LL K++RLDV+N R+ L+ N +I K
Sbjct: 408 NKKSLLGKIMRLDVDNPPRQSEIANQSLWGNYSIPK 443
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 25 RHEAFFQALSIPTKIS-KGTIEIINDVHILKPGDKVG 132
RH +A P IS + + I+ ++ +LKPG+ VG
Sbjct: 598 RHSKRLEARPSPVLISMRAQVRIMKEMRVLKPGEPVG 634
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 542 ESDDDMGFGLFD 577
ESDDDMGF LFD
Sbjct: 99 ESDDDMGFSLFD 110
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 542 ESDDDMGFGLFD 577
ESDDDMGF LFD
Sbjct: 102 ESDDDMGFSLFD 113
>04_04_0095 - 22775340-22776017
Length = 225
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 201 GVRLRYHLRAGNSRHQAGGPSREVPCWSG 287
G+ +RY++ AG+ + + +REVPC G
Sbjct: 37 GLFVRYYVPAGDGKRRIRVDTREVPCGGG 65
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 287 PTWPRSRCPSGTRRSRLRLIPSRTVSRTCSPSLPSHEV 400
PT PRSR PS +RR R+ ++T++ T + + EV
Sbjct: 149 PTTPRSRAPSSSRRRRM---AAQTLATTAAGGQTAAEV 183
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 542 ESDDDMGFGLFD 577
ESDDDMGF LFD
Sbjct: 295 ESDDDMGFSLFD 306
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2
Query: 542 ESDDDMGFGLFD 577
ESDDDMGF LFD
Sbjct: 103 ESDDDMGFSLFD 114
>04_01_0142 +
1640472-1640611,1641618-1641744,1642233-1642425,
1642793-1643349
Length = 338
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 243 HQAGGPSREVPCWSGQRGRALVVHRVPDGR 332
H AG P W G+R RA H +P GR
Sbjct: 13 HLAGQPPLLTAGWGGRRERARRSHAMPTGR 42
>06_03_1442 -
30172595-30172606,30172607-30172684,30173034-30173435,
30173503-30173577,30173667-30173822,30173952-30174143,
30174202-30174208,30175866-30175918
Length = 324
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 85 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLR 264
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I +
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQS 167
Query: 265 EKFLAGVANVAALSLSIGYPTVASAPHSIA 354
+ L VA S+ G+ +A H+++
Sbjct: 168 LRCLRQVAYKDTRSVITGWGRKLAALHALS 197
>06_03_1439 -
30157110-30157121,30157122-30157199,30157549-30157950,
30158018-30158092,30158182-30158337,30158467-30158658,
30158717-30158723,30160381-30160433
Length = 324
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 85 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLR 264
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I +
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQS 167
Query: 265 EKFLAGVANVAALSLSIGYPTVASAPHSIA 354
+ L VA S+ G+ +A H+++
Sbjct: 168 LRCLRQVAYKDTRSVITGWGRKLAALHALS 197
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 85 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLR 264
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I +
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQS 330
Query: 265 EKFLAGVANVAALSLSIGYPTVASAPHSIA 354
+ L VA S+ G+ +A H+++
Sbjct: 331 LRCLRQVAYKDTRSVITGWGRKLAALHALS 360
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +1
Query: 85 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLR 264
E++ +++P D G S +++ +++ P+S VV+ +Y+S + A I +
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQS 330
Query: 265 EKFLAGVANVAALSLSIGYPTVASAPHSIA 354
+ L VA S+ G+ +A H+++
Sbjct: 331 LRCLRQVAYKDTRSVITGWGRKLAALHALS 360
>03_01_0610 +
4478521-4478715,4480003-4480090,4480255-4480321,
4480561-4480679,4480809-4480904,4481019-4481074,
4481400-4481485,4481914-4482048,4482216-4482300
Length = 308
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +1
Query: 184 GLVVKQVYDSGTIFAPAILDI--KPEDLREKFLAG-VANVAALSLSIGYPTVASAPHSIA 354
G ++V+D + L++ P KFLA + + + YP A A H I
Sbjct: 130 GAGTERVFDEVIQYNDGSLEVAFSPSKAMGKFLASELPRTTETTCKVLYPASAKAGHEIQ 189
Query: 355 NGFKN 369
NG N
Sbjct: 190 NGLSN 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,447,787
Number of Sequences: 37544
Number of extensions: 334044
Number of successful extensions: 952
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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