Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H06
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    27   0.39 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   1.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   3.6  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   6.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.3  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 353 AME*GADATVGYPMDNESAATLATPA 276
           A+  GA ATV  PMD +  A  A PA
Sbjct: 246 ALAAGAPATVSTPMDKDDPAAAAAPA 271


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 127 VGASEATLLNMLNISPFS-YGLVVKQVYDSGT--IFAPAILDIKPEDLREKFLAGVANVA 297
           VG +E+   +++N+  F+ Y + +  +Y +G   +   A + +KPED+     A   +  
Sbjct: 261 VGVTESA--DLINLEKFAQYAVAIAAMYKTGLGKLSEKATVKVKPEDVPLNLRAHDVSTH 318

Query: 298 ALSLSIGYP 324
           +++LS   P
Sbjct: 319 SMTLSWAPP 327


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 192 CQTGVRLRYHLRAGNSRHQAGGPSREVPC 278
           C    R +  LR G+  H+A G + EV C
Sbjct: 479 CTGEDRSKRCLRCGDQTHKASGCTNEVKC 507


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 270 VPCWSGQRGRALVVHRVPDGRVCA 341
           +P WS Q  + + V+R+ +  +CA
Sbjct: 348 IPIWSNQECQEVYVNRIYNTTLCA 371


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 186 SCCQTGVRLRYHLRAGNSRHQAGGPSREVPCW 281
           SC     +L Y L A ++RH     +  + C+
Sbjct: 52  SCSDNAAQLTYRLPALSNRHNDNATAEYLSCY 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,770
Number of Sequences: 2352
Number of extensions: 11191
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)