Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H05
         (469 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-14|AAB37896.1|  185|Caenorhabditis elegans Hypothetical p...    33   0.077
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    30   0.72 
Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical pr...    30   0.72 
Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical pr...    30   0.95 
Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z78019-8|CAJ85784.2|  195|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical ...    28   2.9  
Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical ...    27   5.1  
AF098499-1|AAC67397.1|  245|Caenorhabditis elegans Hypothetical ...    27   5.1  
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    27   5.1  
AF003151-9|AAK18911.1|  168|Caenorhabditis elegans Hypothetical ...    27   5.1  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    27   5.1  
Z78017-2|CAD44160.1|  615|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z73976-10|CAD44151.1|  615|Caenorhabditis elegans Hypothetical p...    27   6.7  
Z82288-4|CAB05321.1|  295|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z81593-6|CAB04740.2|  367|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    27   8.9  

>U80836-14|AAB37896.1|  185|Caenorhabditis elegans Hypothetical
           protein B0432.12 protein.
          Length = 185

 Score = 33.5 bits (73), Expect = 0.077
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 214 YSPELNYFLAYQYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLG 378
           Y  ++N+  A ++C   G  LA   ++E+A  +      AG +   +W  G   G
Sbjct: 38  YHLKMNFPRAKKHCEQNGAHLAGITSREEAQKLIDLANEAGESNEQYWLGGQRKG 92


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 325 TNAGYNKYDFWTSGNNLGTDMYLWMSTGLPFNATFN 432
           T    N ++ WT G+  GTD ++W  TG P N  +N
Sbjct: 110 TCTALNSFE-WTDGSTTGTDGFIW-KTGDPNNYLYN 143


>Z22179-5|CAA80162.2|  786|Caenorhabditis elegans Hypothetical
           protein F58A4.5 protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = +1

Query: 214 YSPELNYFLAYQYCRSLGLQLASFETKEKADSITTYLTNAGY---NKYDFWTSGNNLGTD 384
           Y+   ++  A +YC SLG QLA    K   D  + Y  NA     N   FW   +NL  +
Sbjct: 49  YNTPKSFQAARRYCVSLGGQLAD---KINKDDSSLYSANADLEVANSTKFWVGASNLKCN 105

Query: 385 MYLWMSTG-LPFN 420
           +  W + G + FN
Sbjct: 106 I-AWENGGEIEFN 117


>Z74030-4|CAA98436.1|  113|Caenorhabditis elegans Hypothetical
           protein D1054.7 protein.
          Length = 113

 Score = 29.9 bits (64), Expect = 0.95
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 355 WTSGNNLGTDMYLWMSTGLPFNAT 426
           WT G+  GTD ++W  TG P NA+
Sbjct: 57  WTDGSTTGTDGFIW-ETGEPNNAS 79


>Z81478-2|CAB03933.1|  195|Caenorhabditis elegans Hypothetical
           protein C31G12.2 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 355 WTSGNNLGTDMYLWMSTGLPFNA 423
           WT G+  GTD ++W S G P NA
Sbjct: 138 WTDGSTTGTDGWIWRS-GEPNNA 159


>Z78019-8|CAJ85784.2|  195|Caenorhabditis elegans Hypothetical
           protein ZK863.9 protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 241 AYQYCRSLGLQLASFETKEKADSI 312
           A Q C  LG  LASFET ++A S+
Sbjct: 81  AEQECVELGAHLASFETTDEATSV 104


>AF040651-4|AAB95014.1|  234|Caenorhabditis elegans Hypothetical
           protein W04H10.4 protein.
          Length = 234

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 325 TNAGYNKYDFWTSGNNLGTDMYLWMSTGLPFNATFN 432
           T    N ++ WT G+  GTD ++W   G P N  +N
Sbjct: 168 TCTALNSFE-WTDGSTTGTDGFIW-KAGDPNNYQYN 201


>Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical
           protein F13A7.7 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 214 YSPELNYFLAYQYCRSLGLQ-LASFETKEKADSITTYLTNAGYNKYDFWTSG 366
           Y P L+Y  +    R+  +  LASF ++   DS  T+  N G ++ + W  G
Sbjct: 243 YIPNLSYSNSTSSSRASSVDSLASFNSQSSTDSQNTFRKNGGRDQLE-WKQG 293


>AL023851-1|CAA19554.1|  149|Caenorhabditis elegans Hypothetical
           protein Y68A4B.1 protein.
          Length = 149

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 355 WTSGNNLGTDMYLWMSTGLPFNATFNY 435
           WT G+  GTD +LW + G P N    Y
Sbjct: 87  WTDGSTTGTDGFLWRN-GDPNNGGIYY 112


>AF098499-1|AAC67397.1|  245|Caenorhabditis elegans Hypothetical
           protein C43H8.2 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 126 HLDPRSCSSSKDNDYSV 176
           HL  RSCS   DND+ V
Sbjct: 81  HLSERSCSGGSDNDFDV 97


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
           homolog protein.
          Length = 1846

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 351 FLDIGEQSRYGHVSLDEYWIAVQRYL*LHAKAANGRS 461
           F+DIG + R    +L  Y++A Q  + LHA A NG S
Sbjct: 730 FMDIGPRERIRPNTLYAYYVATQ--MVLHAGAKNGVS 764


>AF003151-9|AAK18911.1|  168|Caenorhabditis elegans Hypothetical
           protein D1007.4 protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 459 SVHWQPSHVVKGSVERQSSTHPEIHVRTE 373
           S+ W PS  VK   + +++ +PEIHV  E
Sbjct: 57  SIEWIPSCSVKSIRKLKNTENPEIHVAIE 85


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
           formation protein 2 protein.
          Length = 1843

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 351 FLDIGEQSRYGHVSLDEYWIAVQRYL*LHAKAANGRS 461
           F+DIG + R    +L  Y++A Q  + LHA A NG S
Sbjct: 727 FMDIGPRERIRPNTLYAYYVATQ--MVLHAGAKNGVS 761


>Z78017-2|CAD44160.1|  615|Caenorhabditis elegans Hypothetical
           protein T07C12.12 protein.
          Length = 615

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 220 PELNYFLAY-QYCRSLGLQLASFETKEKADSITTYLTN 330
           P+LN F+   QY R LG++  +   K+K +  TT  +N
Sbjct: 198 PQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSN 235


>Z73976-10|CAD44151.1|  615|Caenorhabditis elegans Hypothetical
           protein T07C12.12 protein.
          Length = 615

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 220 PELNYFLAY-QYCRSLGLQLASFETKEKADSITTYLTN 330
           P+LN F+   QY R LG++  +   K+K +  TT  +N
Sbjct: 198 PQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSN 235


>Z82288-4|CAB05321.1|  295|Caenorhabditis elegans Hypothetical
           protein ZK896.6 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 226 LNYFLAYQYCRSLGLQLASFETKEKADSITTY-LTNAGYNKYDFWTS-GNNLGTDMYLW 396
           L Y  A Q C S+G  LA F+ + + + +T+  ++    N   FW     N   + + W
Sbjct: 187 LPYAAAKQKCESIGKTLAIFDDQMQINFVTSVSVSKFSMNYGSFWVGLTKNTADNTFHW 245


>Z81593-6|CAB04740.2|  367|Caenorhabditis elegans Hypothetical
           protein T20B3.12 protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +1

Query: 211 PYSPELNYFLAYQYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMY 390
           PYS       A  YC SLG  L S  +  +   + T   N G NK +    G     D+ 
Sbjct: 259 PYSLGKTASDAQSYCTSLGSNLVSIHSGNENRYVMT--INFGRNK-NILIGGVAFSNDVM 315

Query: 391 LW 396
           LW
Sbjct: 316 LW 317


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 355 WTSGNNLGTDMYLWMSTGLPFNATFN 432
           WT G+  G+D ++W     P N + N
Sbjct: 143 WTDGSATGSDAFIWNVATEPNNGSLN 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,411,193
Number of Sequences: 27780
Number of extensions: 198994
Number of successful extensions: 559
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)