Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H05
         (469 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.71 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.8  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 216 IRIHSRDEILHAIQLNSRYPL 154
           I + SR +I   I+ NSRYPL
Sbjct: 105 ISVFSRQDIETIIRRNSRYPL 125


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 349 DFWTSGNNLGTDMYLWMSTGLPFNAT 426
           DF+ + N    D YL+  TG P ++T
Sbjct: 374 DFYPTFNQTNVDQYLYNQTG-PLSST 398


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 190 YFISRMNPYSPELNYF 237
           Y++ +  P  P+LNY+
Sbjct: 182 YYLHQFAPEQPDLNYY 197


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 190 YFISRMNPYSPELNYF 237
           Y++ +  P  P+LNY+
Sbjct: 182 YYLHQFAPEQPDLNYY 197


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 295 EKADSITTYLTNAGYNKYDFWTSGNN 372
           E+  ++T + T   Y+KYD   + NN
Sbjct: 102 EQRCTVTMHGTVQSYDKYDLLENVNN 127


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 403 TGLPFNATFNYMR 441
           TGLPF  TFN ++
Sbjct: 932 TGLPFVYTFNVIK 944


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 360 CPEIILVITCVRKIRRYRVRLLFSL 286
           CPE  + IT V  IRR  +   F+L
Sbjct: 214 CPEPYIDITFVVIIRRRTLYYFFNL 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,662
Number of Sequences: 438
Number of extensions: 2403
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)