Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H04
(552 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 140 2e-33
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 140 2e-33
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 140 2e-33
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 140 2e-33
AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A (5... 140 2e-33
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 140 4e-33
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 52 1e-06
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 52 1e-06
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 52 1e-06
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 52 1e-06
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 52 1e-06
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 37 0.054
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 37 0.054
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 37 0.054
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 35 0.17
AK091409-1|BAC03658.1| 192|Homo sapiens protein ( Homo sapiens ... 29 8.2
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 140 bits (340), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 352 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 411
Query: 189 DIPKKNIEVMKEAMDELQQAVDE 257
+IP+KN++VMKEAM + ++A E
Sbjct: 412 EIPRKNLDVMKEAMVQAEEAAAE 434
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 140 bits (340), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 352 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 411
Query: 189 DIPKKNIEVMKEAMDELQQAVDE 257
+IP+KN++VMKEAM + ++A E
Sbjct: 412 EIPRKNLDVMKEAMVQAEEAAAE 434
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 140 bits (340), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 348 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 407
Query: 189 DIPKKNIEVMKEAMDELQQAVDE 257
+IP+KN++VMKEAM + ++A E
Sbjct: 408 EIPRKNLDVMKEAMVQAEEAAAE 430
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 140 bits (340), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 352 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 411
Query: 189 DIPKKNIEVMKEAMDELQQAVDE 257
+IP+KN++VMKEAM + ++A E
Sbjct: 412 EIPRKNLDVMKEAMVQAEEAAAE 434
>AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 218
Score = 140 bits (340), Expect = 2e-33
Identities = 64/83 (77%), Positives = 75/83 (90%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 92 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 151
Query: 189 DIPKKNIEVMKEAMDELQQAVDE 257
+IP+KN++VMKEAM + ++A E
Sbjct: 152 EIPRKNLDVMKEAMVQAEEAAAE 174
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 140 bits (338), Expect = 4e-33
Identities = 68/87 (78%), Positives = 77/87 (88%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
+HSTFIGRA KNKGRISRYLANKCSIASRIDCFSEV +SVFGEKLR+QVE+RL FYETG
Sbjct: 358 FHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETG 417
Query: 189 DIPKKNIEVMKEAMDELQQAVDEEASA 269
+IP+KN++VMKEAM QA EEA+A
Sbjct: 418 EIPRKNLDVMKEAM---VQAEAEEAAA 441
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YH++ +G+ K+KG+ISR LA K +A R D F E SS G + R ++E RL+ E
Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDR 401
Query: 189 DIPK 200
I K
Sbjct: 402 GIRK 405
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YH++ +G+ K+KG+ISR LA K +A R D F E SS G + R ++E RL+ E
Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDR 401
Query: 189 DIPK 200
I K
Sbjct: 402 GIRK 405
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YH++ +G+ K+KG+ISR LA K +A R D F E SS G + R ++E RL+ E
Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDR 401
Query: 189 DIPK 200
I K
Sbjct: 402 GIRK 405
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YH++ +G+ K+KG+ISR LA K +A R D F E SS G + R ++E RL+ E
Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDR 401
Query: 189 DIPK 200
I K
Sbjct: 402 GIRK 405
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YH++ +G+ K+KG+ISR LA K +A R D F E SS G + R ++E RL+ E
Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDR 401
Query: 189 DIPK 200
I K
Sbjct: 402 GIRK 405
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.054
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YHS + + + +R +A KC++A+R+D F E G +L+ ++E + ++
Sbjct: 275 YHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEP 334
Query: 189 DIPKKNIEVMKEAMD 233
P K ++ + +D
Sbjct: 335 P-PVKQVKPLPAPLD 348
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.054
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YHS + + + +R +A KC++A+R+D F E G +L+ ++E + ++
Sbjct: 275 YHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEP 334
Query: 189 DIPKKNIEVMKEAMD 233
P K ++ + +D
Sbjct: 335 P-PVKQVKPLPAPLD 348
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 36.7 bits (81), Expect = 0.054
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVEDRLKFYETG 188
YHS + + + +R +A KC++A+R+D F E G +L+ ++E + ++
Sbjct: 195 YHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEP 254
Query: 189 DIPKKNIEVMKEAMD 233
P K ++ + +D
Sbjct: 255 P-PVKQVKPLPAPLD 268
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 35.1 bits (77), Expect = 0.17
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 9 YHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEVQSSVFGEKLRQQVE 161
YHS + + + +R +A KC++A+R+D F E G +L+ ++E
Sbjct: 275 YHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIE 325
>AK091409-1|BAC03658.1| 192|Homo sapiens protein ( Homo sapiens
cDNA FLJ34090 fis, clone FCBBF3006399. ).
Length = 192
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 43 RTRGGLAGTWLINALSHPGLTVSLKSNHQCSVKNSVSKWKIVLNSMRLV 189
+ R G WL++A +TV++ ++ Q S ++ +W++ S R++
Sbjct: 51 KARDGTFLAWLLSASDATTVTVAVSASSQWSFTSTSRRWRVAFASSRVL 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,015,605
Number of Sequences: 237096
Number of extensions: 813546
Number of successful extensions: 1833
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1833
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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