Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H03
         (461 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   211   8e-57
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   3.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   5.2  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   5.2  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   5.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   9.1  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    22   9.1  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  211 bits (516), Expect = 8e-57
 Identities = 96/105 (91%), Positives = 102/105 (97%)
 Frame = +3

Query: 147 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 326
           MSIQNLNTFDPFADAIK ++ DVQDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVRAC
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRAC 60

Query: 327 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTRSGLVKPEQL 461
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLT+SGL KPEQL
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQL 105


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +3

Query: 300 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTRSGLVKPEQL 461
           DL ++V +  ++F C   V+  PE  E+L LQ  +   I  WLT+    +  Q+
Sbjct: 532 DLMQMVSSQMQQFLCLQNVLLEPETDELL-LQFYEASAI--WLTQLSAREASQI 582


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -3

Query: 423 TDKCSRAGRLAVAAPRRTPGAPQRYRCTRTP-SCMPARSSSSHIPRTSPAPWSMFYARSA 247
           T +C R  R      R TP +P+  + +  P  C    S  S + R +PA  +    RS+
Sbjct: 33  TVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSM-RCAPARTASCSTRSS 91


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 71  SVTVILLKCVVSQRFIETKSIYVQSYVHP 157
           SVT  +   V S+ F  T +I+ Q+  HP
Sbjct: 85  SVTKFIYFAVNSENFYRTLAIWNQTNTHP 113


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 71  SVTVILLKCVVSQRFIETKSIYVQSYVHP 157
           SVT  +   V S+ F  T +I+ Q+  HP
Sbjct: 85  SVTKFIYFAVNSENFYRTLAIWNQTNTHP 113


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 348  RCTRTPSCMPARSSSSHIPRTSPAPWSMFYARSAAGFGRALDHLARRP 205
            RC+   SC  + +SSSH   +S +  S   A S AG G+   H    P
Sbjct: 1084 RCSNG-SC--SSTSSSHSNHSSHSSSSSNSAGSWAGMGKQESHYVMYP 1128


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 288 SSEYDLKKIVRACKKEFACNGTVVEHPEY 374
           S E  L  I    +   A NGT+V+ PEY
Sbjct: 304 SDELRLSSIDLLLQSLTAENGTLVQDPEY 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,008
Number of Sequences: 2352
Number of extensions: 11055
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)