Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H03
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical pr... 123 7e-29
AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical ... 31 0.30
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 28 0.50
Z79600-6|CAB01879.2| 529|Caenorhabditis elegans Hypothetical pr... 29 1.6
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 29 1.6
AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRN... 29 1.6
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 2.1
AF038613-10|AAB92047.1| 148|Caenorhabditis elegans Hypothetical... 29 2.1
AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical... 28 2.8
AF099925-9|AAC69500.1| 150|Caenorhabditis elegans Hypothetical ... 27 4.9
AF077541-6|AAC64630.1| 307|Caenorhabditis elegans Hypothetical ... 27 4.9
Z81564-11|CAB04576.1| 436|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical p... 27 6.5
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 6.5
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 6.5
U50072-4|AAA93451.1| 250|Caenorhabditis elegans Cytochrome p450... 27 6.5
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 6.5
AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream o... 27 6.5
U58756-7|AAY44004.1| 220|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 27 8.6
>U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical
protein T27F7.3b protein.
Length = 109
Score = 123 bits (296), Expect = 7e-29
Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +3
Query: 147 MSIQNLNTFDPFADAIKS--SEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR 320
MSI NLN P ADA + +ED V+ G+ H+RIQQR GRKT+TTVQG+ +EYDLK+IV+
Sbjct: 1 MSIANLNR--P-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTITTVQGIGTEYDLKRIVQ 57
Query: 321 ACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTRSGLV 446
KK+ +CNGT+VEHPEYGEV+QL GDQR+ + +L + G+V
Sbjct: 58 YLKKKHSCNGTIVEHPEYGEVIQLTGDQRDKVKDFLIKVGIV 99
>AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical
protein C17E7.4 protein.
Length = 364
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 282 PAPWSMFYARSAAGFGRALDHLARRPPSF**HRRMGRMCSDS 157
PAP S Y F R++D L PPS+ + + +CS S
Sbjct: 258 PAPRSFAYPNPPLPFHRSMDFLNSGPPSYLYNENLSSLCSSS 299
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 28.3 bits (60), Expect(2) = 0.50
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 387 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAP 274
A P P P + RTPS P++S+ + P +SPAP
Sbjct: 1354 AIPVERPKQPTPSKA-RTPSKTPSQSNRAQHPASSPAP 1390
Score = 21.0 bits (42), Expect(2) = 0.50
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 300 HIPRTSPAPWSMFYARSAAGFGRALD 223
H+P TS +FY + + G +D
Sbjct: 1403 HVPPTSLTSPDLFYRQFLSSMGMPMD 1428
>Z79600-6|CAB01879.2| 529|Caenorhabditis elegans Hypothetical
protein F59C6.8 protein.
Length = 529
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 135 TFNRMSIQNLNTFDPF-ADAIKSSEDDVQDGL-VHVRIQQRNGRKTLTTV 278
TFNR I N FDP+ +A K + + DGL + + + R + T+ T+
Sbjct: 398 TFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTI 447
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 240 IQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENIC 419
++Q+ G K L V G+ L ++ + CN +P Y + ++ +E+
Sbjct: 31 VEQKTGVKRLHLVLGVVGLQALY-LIFGHSAQLVCNFMGFVYPAYMSIKAIESSNKEDDT 89
Query: 420 QWLT 431
QWLT
Sbjct: 90 QWLT 93
>AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRNA
synthetase (mitochondrial)protein.
Length = 500
Score = 29.1 bits (62), Expect = 1.6
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 162 LNTFDP-FADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVR--ACKK 332
+ T DP +A++ +QD ++ +G ++T + E +KKIV A K
Sbjct: 79 IRTTDPAHLEAVQHFWMKIQDN-GYIYKSTYSGYYSITDECFIPEEDVVKKIVEGGAEKL 137
Query: 333 EFACNGTVVEHPEYGEVLQLQGDQRENICQWLTRSGLV 446
NGT VE E + + RE + +W+ R +V
Sbjct: 138 TLKSNGTPVEWIEEENYMFRLSEFREKVAEWINRENIV 175
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 387 AAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRT-SPAP 274
+AP TP AP TP PA + + P T +PAP
Sbjct: 101 SAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAP 139
>AF038613-10|AAB92047.1| 148|Caenorhabditis elegans Hypothetical
protein F42A6.2 protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 399 RLAVAAPRRTPGAPQRYRCTRTPSCMPARSSSSHIPRTSPAPWSMFYARSAAGFGRA 229
R +AAP TP AP+ P+ PA S SS S A + FG++
Sbjct: 77 RSTLAAPTPTPAAPELRSTLSAPTPTPAPSGSSGFSFGSIAKLMEEFMEKVFNFGKS 133
>AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical
protein Y105E8A.20 protein.
Length = 406
Score = 28.3 bits (60), Expect = 2.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 252 NGRKTLTTVQGLSSEYDLKKIVR--ACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQW 425
+G ++T + E +KKIV A K NGT VE E + + RE + +W
Sbjct: 15 SGYYSITDECFIPEEDVVKKIVEGGAEKLTLKSNGTPVEWIEEENYMFRLSEFREKVAEW 74
Query: 426 LTRSGLV 446
+ R +V
Sbjct: 75 INRENIV 81
>AF099925-9|AAC69500.1| 150|Caenorhabditis elegans Hypothetical
protein K01A2.9 protein.
Length = 150
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 373 YSGCSTTVPLHANSFLHARTIFFK 302
YS C+TTV + + LH+ ++F+K
Sbjct: 126 YSSCATTVSVGIHLVLHSMSVFWK 149
>AF077541-6|AAC64630.1| 307|Caenorhabditis elegans Hypothetical
protein Y23H5A.3 protein.
Length = 307
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 279 QGLSSEYDLKKIVRACKKEFACNGTVVEH--PEYGEVLQLQGDQRENICQWLTRSG 440
Q S+EY+ K++ A + F G + ++ + V Q N+CQW+ RSG
Sbjct: 95 QSQSNEYEWMKVL-ASRYGFVRQGLLYDNCANRFQNVETDQNSVFRNMCQWIYRSG 149
>Z81564-11|CAB04576.1| 436|Caenorhabditis elegans Hypothetical
protein K05C4.11 protein.
Length = 436
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 243 QQRNGRKTL-TTVQGLSSEYDLKKIVRACKKEFACNG 350
++R G K + T V+GL E D +CK +F C+G
Sbjct: 290 EERIGFKVVWTAVEGLIGEGDESVNGNSCKDQFMCHG 326
>Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical
protein C36A4.3 protein.
Length = 502
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 31 NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 153
N+S S TPP +I D+ + E + +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 170 CVQILDGHTIERRCSLFQ*NAAIQRTS 90
C++IL+G T E RC++ + A + TS
Sbjct: 228 CIKILEGSTYELRCAVAKFTAQLLATS 254
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 390 VAAPRRTPG-APQRYRCTRTPSCMP--ARSSSSHI-PRTSPAP 274
VA+PRR +P+R R R+PS P R S+S I R SP+P
Sbjct: 486 VASPRRRRSPSPERQRKRRSPSDSPPTRRLSTSPIRRRRSPSP 528
>U50072-4|AAA93451.1| 250|Caenorhabditis elegans Cytochrome p450
family protein 25A6 protein.
Length = 250
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 31 NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 153
N+S S TPP +I D+ + E + +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 390 VAAPRRTPG-APQRYRCTRTPSCMP--ARSSSSHI-PRTSPAP 274
VA+PRR +P+R R R+PS P R S+S I R SP+P
Sbjct: 486 VASPRRRRSPSPERQRKRRSPSDSPPTRRLSTSPIRRRRSPSP 528
>AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream of
daf-16 (regulatedby daf-16) protein 19 protein.
Length = 406
Score = 27.1 bits (57), Expect = 6.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 81 LYC*SALYRSVSLKQRAS--TFNRMSIQN-LNTFDPFADAIKSSEDDVQDGLVHVRIQQR 251
L+ SAL+ S +Q S F MS+ N LN P+ + + DD + L + +
Sbjct: 7 LFTVSALFMCGSAQQLMSLKNFEGMSVHNDLNVDAPYNFYVSADSDDA-NVLQQISVVTE 65
Query: 252 NGRKTL 269
+G+KTL
Sbjct: 66 SGQKTL 71
>U58756-7|AAY44004.1| 220|Caenorhabditis elegans Hypothetical
protein F58F9.10 protein.
Length = 220
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = -2
Query: 409 SRWSPCSCSTSPYSG----CSTTVPLHANSFLHARTIFFKSYSEDKPCTVVN 266
SR+ PC+ + Y C VPL NS + I S + PC VN
Sbjct: 79 SRYVPCNTNVCKYPSQRACCIPYVPLLINSTMQCGPIPKDKSSSNTPCCPVN 130
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 22 VRVNWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHL 135
V +W PV N V+S SY V +C FH +HL
Sbjct: 94 VPFSWFPVDQNRTS-VLSVSYTVSEKCDQNFHDLPQHL 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,170,866
Number of Sequences: 27780
Number of extensions: 235259
Number of successful extensions: 885
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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