Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H02
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   0.93 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   0.93 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   0.93 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   0.93 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   0.93 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   0.93 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   0.93 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   0.93 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.5  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 13/55 (23%), Positives = 22/55 (40%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A+     P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/55 (23%), Positives = 21/55 (38%)
 Frame = +3

Query: 354 HRITPEEAKYKLCNVRRVATGPKSVPYLVTHDGRTLRYPDPLINVNDSVQLDIST 518
           H + P    Y     +R+A      P   TH   + +Y D   +   +   D+ST
Sbjct: 64  HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 12  LFNMARGPKKHLKRLNAPKAWMLDKLG 92
           +  + R P +++K++N   A  LD+ G
Sbjct: 606 VIGIGRSPDQNVKKINLKHALDLDRQG 632


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 21  MARGPKKHLKRLNAPKAWMLDKLG 92
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRRG 632


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 79  WTSWAACTRRGPR 117
           W +W  CTR   R
Sbjct: 190 WPAWVYCTRYSDR 202


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 186 LTGNEVLKIVKQRLIK 233
           L  N++LK++++ L+K
Sbjct: 392 LQQNKILKVIRKNLVK 407


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,541
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)