Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_H01
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.3  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.4  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.4  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.4  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.4  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   7.6  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   7.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 161 KIEILIYINRVSGLGVTAASRLHRARDMRNY 69
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 108 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 138


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 161 KIEILIYINRVSGLGVTAASRLHRARDMRNY 69
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 109 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 139


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 161 KIEILIYINRVSGLGVTAASRLHRARDMRNY 69
           +I +   IN ++G+G T  +     RD +NY
Sbjct: 109 RIYVDTVINHMTGMGGTGTAGSQADRDGKNY 139


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -3

Query: 424 KNNLKSIDICHRCYRQI 374
           +++ ++IDIC RC+ Q+
Sbjct: 226 RSDEQTIDICMRCHDQL 242


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
           L   TLP D  E   L +T+LLS  V
Sbjct: 230 LLGFTLPPDSGEKLTLGVTILLSLTV 255


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 337 SVCAYSFQTFPD*FVDNICDKYQSILDYF 423
           S+C   +  F +  + N+C K     DYF
Sbjct: 67  SICEDCYMLFREPQLHNLCRKNCFTTDYF 95


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 337 SVCAYSFQTFPD*FVDNICDKYQSILDYF 423
           S+C   +  F +  + N+C K     DYF
Sbjct: 67  SICEDCYMLFREPQLHNLCRKNCFTTDYF 95


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 161 YKEDHNFFSFFIESRIIM 214
           +K D+ +FSF+I S  ++
Sbjct: 51  HKSDYFYFSFYITSYTLL 68


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 161 YKEDHNFFSFFIESRIIM 214
           +K D+ +FSF+I S  ++
Sbjct: 51  HKSDYFYFSFYITSYTLL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,684
Number of Sequences: 336
Number of extensions: 2574
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)