Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_H01
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 22 3.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 6.7
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 135 IYINEYFYFIKRITIFFLF 191
++ N +F+FI IT+ FL+
Sbjct: 1 MFKNYHFFFILVITLIFLY 19
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 298 TIVDNKTVINKLNYSQTSRGSVNA 227
TIVD ++NK N ++ SVN+
Sbjct: 514 TIVDISKLVNKRNNAKIYTSSVNS 537
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 213 LLGFTLPPDSGEKLTLGVTILLSLTV 238
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 281 LLGFTLPPDSGEKLTLGVTILLSLTV 306
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 LKALTLPRDVCE*FNLFITVLLSTMV 299
L TLP D E L +T+LLS V
Sbjct: 281 LLGFTLPPDSGEKLTLGVTILLSLTV 306
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 6.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 234 TLPRDVCE*FNLFITVLLSTMV 299
TLP D E +L +T+LLS V
Sbjct: 254 TLPPDSGEKLSLGVTILLSLTV 275
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,936
Number of Sequences: 438
Number of extensions: 3387
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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