Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G24
(188 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.06 |||transcription factor TFIID complex subunit 8 |Sch... 26 0.57
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 25 1.3
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 25 1.7
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 24 2.3
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 24 2.3
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 24 2.3
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 24 3.0
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 23 4.0
SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 23 5.3
SPAC23C11.17 |||mitochondrial inner membrane protein involved in... 23 5.3
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 23 7.0
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 22 9.3
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 22 9.3
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 22 9.3
>SPCC1259.06 |||transcription factor TFIID complex subunit 8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 222
Score = 26.2 bits (55), Expect = 0.57
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 31 YPLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSP 153
YP+ P P + T R++ H + N PR +SP
Sbjct: 149 YPVRPTSPKQIRELATQESRLAEHALRKILNVNQPRSADSP 189
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 111 PLRQAQWASSVQQSNG 158
PL Q W S+VQ++NG
Sbjct: 342 PLNQKYWLSAVQKNNG 357
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 24.6 bits (51), Expect = 1.7
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 3 TRPDVKRPEIPTKPPGAVR---RIW 68
T P +K+PEIP + G ++ ++W
Sbjct: 595 TPPHIKKPEIPLRVSGPIKVEAKVW 619
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 24.2 bits (50), Expect = 2.3
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = -3
Query: 159 PHWTVERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRGV 40
P + ++ P G GG++++ HP+ RG+
Sbjct: 59 PEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGL 98
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 24.2 bits (50), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 69 DGDDTGSREHAPHRPLRQAQWASSVQQSNGDGWEN 173
+G + S EH P L Q + Q S+GD N
Sbjct: 684 NGSENESLEHEPTNELPQRPLVNQSQNSHGDDAPN 718
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +3
Query: 66 WDGDDTGSREHAPHRPLRQAQWASSVQQSN 155
W+ DD +EH H P WA + N
Sbjct: 78 WEDDDDPLKEHITHSP--SCPWAYILSSKN 105
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 23.8 bits (49), Expect = 3.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +3
Query: 63 IWDGDDTGSREHAPHRPLRQ 122
+W+G+ T R PH P ++
Sbjct: 144 LWEGNLTNPRSEQPHTPCKK 163
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 23.4 bits (48), Expect = 4.0
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGG--DAVHAHAIPYRPH 70
+GSG T W +E+ + I + G D V +P P+
Sbjct: 122 TGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPN 161
>SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 473
Score = 23.0 bits (47), Expect = 5.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 77 VPIPNAADGPGGFSGYFR 24
+P P +DGP G Y +
Sbjct: 450 IPYPAGSDGPEGLEAYMK 467
>SPAC23C11.17 |||mitochondrial inner membrane protein involved in
potassium ion transport|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 23.0 bits (47), Expect = 5.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 15 VKRPEIPTKPPGAVRRIWDG 74
VK+P I + G V WDG
Sbjct: 113 VKKPSIWQRVKGGVLHFWDG 132
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAA 115
SGS T W ++ TR +GL+A
Sbjct: 501 SGSLDKTIKVWELQATRSVGLSA 523
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 22.2 bits (45), Expect = 9.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 80 IVPIPNAADGPGG 42
++P+P DGP G
Sbjct: 241 LIPVPGGNDGPSG 253
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 22.2 bits (45), Expect = 9.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 103 RIAPCGKPNGPRPFNSPMG 159
RIA C KP P F G
Sbjct: 523 RIATCDKPEDPHQFKLQSG 541
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSP 153
P+ PP A G + + + + A +P P P+ +P
Sbjct: 87 PVQPPNDPAIIGSNSGQYNWNQAQTAQPPQPVQPNPYGAP 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,438
Number of Sequences: 5004
Number of extensions: 15302
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 2,362,478
effective HSP length: 43
effective length of database: 2,147,306
effective search space used: 40798814
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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