Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G24
(188 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0015 - 7377659-7378477,7378938-7378988 30 0.23
11_06_0310 + 22274762-22275412,22275515-22275725,22276713-222773... 30 0.30
02_05_0095 + 25778461-25778596,25778940-25779069,25780459-25781146 29 0.40
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142 27 1.6
06_03_1473 - 30382528-30382731,30382814-30382930,30383048-303831... 27 1.6
12_01_0693 - 5916324-5916713 27 2.1
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 27 2.1
11_06_0273 - 21810317-21810535,21810673-21810740,21810879-21810960 27 2.8
06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537... 27 2.8
06_01_0420 + 2998269-2999195 27 2.8
04_01_0581 + 7555323-7555383,7555640-7555727,7556063-7557047 27 2.8
05_02_0141 - 7049557-7050333,7050522-7050557 26 3.7
05_01_0552 + 4837392-4837910 26 4.9
04_04_1303 - 32487174-32487871,32488583-32489123 26 4.9
04_01_0530 - 6928528-6929500,6929514-6930964 26 4.9
02_04_0522 - 23654012-23654611,23654761-23655081 26 4.9
02_03_0103 + 15244812-15245180,15245258-15245851 26 4.9
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 25 6.4
09_01_0050 + 853712-855368,855440-856113 25 6.4
07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587 25 6.4
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 25 6.4
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 25 6.4
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 25 6.4
04_04_0074 - 22537559-22537951,22539143-22539271,22540410-225405... 25 6.4
03_03_0105 + 14491198-14493636,14494793-14494957,14495647-144957... 25 6.4
02_04_0582 - 24076614-24076643,24076961-24077440 25 6.4
01_01_1137 + 9017211-9018584 25 6.4
10_08_0606 - 19164215-19164619 25 8.5
05_04_0230 + 19250513-19250633,19250681-19251165 25 8.5
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 25 8.5
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 25 8.5
>05_03_0015 - 7377659-7378477,7378938-7378988
Length = 289
Score = 30.3 bits (65), Expect = 0.23
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPY 79
+G+ +TVE +P+ +GG+ V H +PY
Sbjct: 184 TGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPY 218
>11_06_0310 +
22274762-22275412,22275515-22275725,22276713-22277388,
22277739-22277816,22278228-22278573
Length = 653
Score = 29.9 bits (64), Expect = 0.30
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 24 PEIPTKPPGAVRRIWDGDDTGSREHAPHRPLRQAQWASSVQQSNGDGWEN 173
P IP K AV+R W DD S +++ +SS ++S+ + E+
Sbjct: 592 PHIPEKVLYAVKRYWTADDKSSEPEPEPEKMKKKAGSSSQERSSEEEEES 641
>02_05_0095 + 25778461-25778596,25778940-25779069,25780459-25781146
Length = 317
Score = 29.5 bits (63), Expect = 0.40
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 33 PTKPPGAVRRIWDGDDTGSREHAPHRPLRQAQWASSVQQSNGDGWENRCLT 185
PT P A D DD+ S + PH P + + +S+ ++ CLT
Sbjct: 129 PTTPASAASSPADSDDSHSLQQKPHEP-ANSDSSEPAHESSSASADSSCLT 178
>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
Length = 751
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 42 PPGAVRRIWDGDDTGSREHAPHRPLRQAQWASSV 143
P A RR W+G +R PH R+ + SSV
Sbjct: 616 PSTATRRGWEGRSRQTRPDLPHVAQREGEGESSV 649
>06_03_1473 -
30382528-30382731,30382814-30382930,30383048-30383129,
30383211-30383278,30383444-30383545,30383994-30384122,
30384561-30384623,30384781-30384897,30385210-30386116,
30386225-30386494,30386929-30386998,30387114-30387273
Length = 762
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 186 ASGSGSPTHPHWTVERTRPIGLAAGGDAVHAHA 88
+S SG+P + V++ +GL D VH+HA
Sbjct: 244 SSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHA 276
>12_01_0693 - 5916324-5916713
Length = 129
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 129 IGLAAGGDAVHAHAIPYRPHPKCGGRPR 46
+G A GGD H PHP GG R
Sbjct: 58 VGGAVGGDGSHLACSASAPHPTLGGCER 85
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPYRPHPK 64
+G+GS P ER P + A AVH P R P+
Sbjct: 299 AGNGSGWLPRRYTERAAPTVIRASAGAVHPEESPARASPE 338
>11_06_0273 - 21810317-21810535,21810673-21810740,21810879-21810960
Length = 122
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 117 AGGDAVHAHAIPYRP-HPKCGGRP 49
AG D +H H P RP H + GRP
Sbjct: 99 AGPDPMHHHGSPRRPEHARSTGRP 122
>06_01_0730 +
5370575-5370761,5371395-5371438,5372057-5372204,
5372289-5372397,5373349-5373863,5374571-5374808,
5375296-5375560,5375740-5375844,5375950-5376015,
5376562-5377020,5377267-5377464,5378149-5378211
Length = 798
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 37 LNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMG 159
L PG + G ++ VS ++ P G P+G + P G
Sbjct: 636 LQMPGGGSHLAAGGMKYGVSQYKPVPAGSPSGYGNYTHPAG 676
>06_01_0420 + 2998269-2999195
Length = 308
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 120 AAGGDAVHAHAIPYRPHPKC 61
+ GG AV AHA+ P P C
Sbjct: 181 SGGGKAVAAHAVAMEPGPSC 200
>04_01_0581 + 7555323-7555383,7555640-7555727,7556063-7557047
Length = 377
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 75 DDTGSREHAPHRPLRQAQWASSVQQSNGDGWENRCL 182
+DTG R + AQWA + Q + WE +CL
Sbjct: 32 NDTGRRTKRRWKEEEAAQWAIARVQQLWNEWEIQCL 67
>05_02_0141 - 7049557-7050333,7050522-7050557
Length = 270
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 153 WTVERTRPIGLAAGGDAVHAHAIPY 79
+ VE RP+ + GGD V H +PY
Sbjct: 187 YRVEAVRPVAVP-GGDMVACHGMPY 210
>05_01_0552 + 4837392-4837910
Length = 172
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 69 DGDDTGSREHAPHRPLRQAQWASSVQQSNGDGW 167
DGDD + R L+ A WA S S W
Sbjct: 80 DGDDDSAAVRRRRRSLKMAVWALSTALSAAFAW 112
>04_04_1303 - 32487174-32487871,32488583-32489123
Length = 412
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 9 PDVKRPEIPTKPPGAVRRIWDGDDTGSREHAP 104
PD+ R T+ P A R DG+ G H P
Sbjct: 197 PDIHRGRAATRTPKAARITRDGEVHGKTLHRP 228
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 171 SPTHPHWTVERTRPIGLAAG 112
S THPHW++ +G+A G
Sbjct: 606 SDTHPHWSLRVQVALGVARG 625
>02_04_0522 - 23654012-23654611,23654761-23655081
Length = 306
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 110 AMRCMLTRSRIVPIPNAADGPGGFSGYF 27
AMR + S++ + DG GF G F
Sbjct: 272 AMRAQIAASKVAALNGGFDGSSGFGGEF 299
>02_03_0103 + 15244812-15245180,15245258-15245851
Length = 320
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 110 AMRCMLTRSRIVPIPNAADGPGGFSGYF 27
AMR + S++ + DG GF G F
Sbjct: 289 AMRAQIAASKVAALNGGFDGSSGFGGEF 316
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 46 PGPSAAFGMGTIRDRVSMHRIAPCGKPN 129
PGPS G GT +D +M+ +P G PN
Sbjct: 1612 PGPST--GNGTGQDNNNMNWNSPSGNPN 1637
>09_01_0050 + 853712-855368,855440-856113
Length = 776
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +1
Query: 52 PSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+AA G G + S + P G P P G G A
Sbjct: 623 PAAAAGAGRFGSKRSAKSLPDLSPPPGASPLAGPSGSGDTAVA 665
>07_01_1026 - 8865924-8866225,8867051-8867297,8867561-8867587
Length = 191
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 180 GSGSPTHPHWTVERTRPIGLAAGGDAVH 97
GSG+P P W +G GD H
Sbjct: 61 GSGAPARPVWLCAVAAKVGRGGDGDERH 88
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 30 IPTKPPGAVRRIWDGDDTGSREHAPHRP 113
+P +PP + R + GD G R++ H P
Sbjct: 31 LPRRPPASCRCYYYGDGGGFRKNYDHIP 58
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSP 153
PL+ P P+A +G+ + P G P P +P
Sbjct: 137 PLHSPAPAAGLAIGSFASDLGAPWFCPRGHPVSLLPIETP 176
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +3
Query: 30 IPTKPPGAVRRIWDGDDTGSREHAPH---RPLRQAQWASSVQQSN 155
IP PG V D D E A H RP+R + W + SN
Sbjct: 300 IPHLQPGRVPSTVDPDSMNPTERAKHYPKRPVRISAWKLAKLDSN 344
>04_04_0074 -
22537559-22537951,22539143-22539271,22540410-22540541,
22540546-22540996,22541301-22541443
Length = 415
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 6 RPDVKRPEIPTKPPGAVRRIWDGDDTGSREHA 101
R VK P + P GA++ + DG++ + A
Sbjct: 145 RTTVKVPGVKQDPRGAIKELTDGEEDARNQSA 176
>03_03_0105 +
14491198-14493636,14494793-14494957,14495647-14495760,
14496223-14496487,14497164-14497237,14497851-14497928
Length = 1044
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 108 RPLRQAQWASSVQQSNGDGWENRCLTH 188
RP+R A + + S G GW R L H
Sbjct: 243 RPMRSALSRTFSRSSQGTGWVQRFLLH 269
>02_04_0582 - 24076614-24076643,24076961-24077440
Length = 169
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 186 ASGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPYRPHPKCGG 55
+ G G+P P R A G+ A A+P P P+ GG
Sbjct: 59 SGGDGAPVLPVECRWSGRVRSFAGAGEGAGAAAVPACPAPRRGG 102
>01_01_1137 + 9017211-9018584
Length = 457
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 141 RTRPIGLAAGGDA--VHAHAIPYRPHPK 64
R R G AGG V AH IP P P+
Sbjct: 272 RARAAGKVAGGRVVRVEAHPIPEHPRPR 299
>10_08_0606 - 19164215-19164619
Length = 134
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPYRP 73
S P P + + + AAGG+ V +A PYRP
Sbjct: 7 SSDDDPLVPQFGRQIDSGVVAAAGGNLVALYAGPYRP 43
>05_04_0230 + 19250513-19250633,19250681-19251165
Length = 201
Score = 25.0 bits (52), Expect = 8.5
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = -3
Query: 186 ASGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRP 49
+ GSG W R A GGDAV P R + GRP
Sbjct: 125 SGGSGRRRCGRWASSRPDLAAGAVGGDAVGGGPCPARIWRRERGRP 170
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 25.0 bits (52), Expect = 8.5
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRP 49
S S P + R+R A GG V A A P GGRP
Sbjct: 2 SSSSRPGRASISPFRSRRTSAAGGGAGVAAAAHPPPARTSSGGRP 46
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 105 HRPLRQAQWASSVQQ 149
HRPLR+ +WA S ++
Sbjct: 457 HRPLREGKWAVSFEE 471
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,151,269
Number of Sequences: 37544
Number of extensions: 162321
Number of successful extensions: 667
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 42
effective length of database: 13,216,500
effective search space used: 264330000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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