Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G24
(188 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 30 1.5
Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for ... 30 1.5
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 30 1.5
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 30 1.5
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 30 1.5
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 30 1.5
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 29 2.6
K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein. 29 2.6
BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated ... 29 2.6
BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein. 29 2.6
AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated ... 29 2.6
AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated ... 29 2.6
AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated ... 29 2.6
AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated ... 29 2.6
AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein. 29 2.6
AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein. 29 2.6
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 29 3.5
BC016028-1|AAH16028.1| 248|Homo sapiens chromosome 14 open read... 29 3.5
AK024506-1|BAB15796.1| 169|Homo sapiens FLJ00116 protein protein. 29 3.5
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 28 4.6
X76400-1|CAA53980.2| 514|Homo sapiens nectin 1 protein. 28 6.1
BC113471-1|AAI13472.1| 517|Homo sapiens poliovirus receptor-rel... 28 6.1
BC104948-1|AAI04949.1| 517|Homo sapiens poliovirus receptor-rel... 28 6.1
AF252867-1|AAG16648.1| 490|Homo sapiens HVEC cell-cell adhesion... 28 6.1
AF060231-1|AAC23798.1| 517|Homo sapiens herpesvirus entry prote... 28 6.1
BC044644-1|AAH44644.1| 576|Homo sapiens CENTG3 protein protein. 27 8.1
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 341
>Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for
prepro-alpha2(I) collagen (COL1A2). ).
Length = 765
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 341
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 341
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 341
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 341
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P+G G T A
Sbjct: 113 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGA 161
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRP--FNSPMG 159
P PP P G D S +P GKP GP P N P G
Sbjct: 178 PQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG 221
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRP--FNSPMG 159
P PP P G D S +P GKP GP P N P G
Sbjct: 116 PQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG 159
>K03208-1|AAA60189.1| 251|Homo sapiens PRB2 protein.
Length = 251
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRP--FNSPMG 159
P PP P G D S +P GKP GP P N P G
Sbjct: 47 PQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG 90
>BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1797
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1259 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1288
>BC036669-1|AAH36669.1| 496|Homo sapiens COL25A1 protein protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 57 RRIWDGDDTGSREHAPHRPLRQAQWASSVQQSNGDGW 167
RR W+ TGS H P RP R + W + ++ W
Sbjct: 428 RRFWNAGSTGSFYHRPTRPTR-SPWPTWPHGTSWTSW 463
>AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1260 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1289
>AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1260 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1289
>AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1260 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1289
>AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1260 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1289
>AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein.
Length = 1734
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 1260 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 1289
>AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein.
Length = 1329
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 183 SGSGSPTHPHWTVERTRPIGLAAGGDAVHA 94
SG GSPTH H R+ G DAVH+
Sbjct: 791 SGPGSPTHSHSLSPRSPTQGYRVTPDAVHS 820
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRPFNSPMGMGGRTAA 180
P+ PPG A G+ + + +A GPR P G G T A
Sbjct: 293 PVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPPGAAGTTGA 341
>BC016028-1|AAH16028.1| 248|Homo sapiens chromosome 14 open reading
frame 80 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 27 EIPTKPPGAVRRIWDGDDTGSREHAPHRPLRQAQWAS 137
E K GA+++ W+ D ++ H PHR +R+ A+
Sbjct: 158 EAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAA 194
>AK024506-1|BAB15796.1| 169|Homo sapiens FLJ00116 protein protein.
Length = 169
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 27 EIPTKPPGAVRRIWDGDDTGSREHAPHRPLRQAQWAS 137
E K GA+++ W+ D ++ H PHR +R+ A+
Sbjct: 79 EAVEKELGALQQCWERDGGPAQPHGPHRLVRREDGAA 115
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGP 135
P+ PPGP G G + + ++ P G P GP
Sbjct: 462 PIGPPGPQGPAGQGLPGSKGEVGQMGPTG-PRGP 494
>X76400-1|CAA53980.2| 514|Homo sapiens nectin 1 protein.
Length = 514
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 144 ERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRG 43
E T PIG +G V+ PY P P GR G
Sbjct: 314 EATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAG 347
>BC113471-1|AAI13472.1| 517|Homo sapiens poliovirus
receptor-related 1 (herpesvirus entry mediator C)
protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 144 ERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRG 43
E T PIG +G V+ PY P P GR G
Sbjct: 317 EATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAG 350
>BC104948-1|AAI04949.1| 517|Homo sapiens poliovirus
receptor-related 1 (herpesvirus entry mediator C)
protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 144 ERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRG 43
E T PIG +G V+ PY P P GR G
Sbjct: 317 EATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAG 350
>AF252867-1|AAG16648.1| 490|Homo sapiens HVEC cell-cell adhesion
molecule/herpesvirus receptor protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 144 ERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRG 43
E T PIG +G V+ PY P P GR G
Sbjct: 290 EATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAG 323
>AF060231-1|AAC23798.1| 517|Homo sapiens herpesvirus entry protein
C protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 144 ERTRPIGLAAGGDAVHAHAIPYRPHPKCGGRPRG 43
E T PIG +G V+ PY P P GR G
Sbjct: 317 EATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAG 350
>BC044644-1|AAH44644.1| 576|Homo sapiens CENTG3 protein protein.
Length = 576
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 34 PLNPPGPSAAFGMGTIRDRVSMHRIAPCGKPNGPRP 141
P PP + +G +R R+ +AP G P P P
Sbjct: 65 PEPPPTGARGLLLGLLRPRLGRRGLAPSGPPVSPAP 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,107,734
Number of Sequences: 237096
Number of extensions: 819359
Number of successful extensions: 3009
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3009
length of database: 76,859,062
effective HSP length: 42
effective length of database: 66,901,030
effective search space used: 1338020600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -