Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G23
         (474 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5LPR2 Cluster: Enoyl-CoA hydratase/isomerase family pr...    33   2.4  
UniRef50_A7S1K7 Cluster: Predicted protein; n=1; Nematostella ve...    33   2.4  
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re...    33   3.2  
UniRef50_A6DDM8 Cluster: Type II and III secretion system protei...    33   4.3  
UniRef50_Q8F296 Cluster: Putative uncharacterized protein; n=2; ...    32   7.4  
UniRef50_Q3WJD8 Cluster: Putative uncharacterized protein; n=1; ...    32   7.4  
UniRef50_A0D423 Cluster: Chromosome undetermined scaffold_37, wh...    32   7.4  
UniRef50_A4D170 Cluster: Oxysterol-binding protein; n=16; Euther...    31   9.8  
UniRef50_A4D168 Cluster: Oxysterol-binding protein; n=11; Eutele...    31   9.8  
UniRef50_Q9H4L5 Cluster: Oxysterol-binding protein-related prote...    31   9.8  

>UniRef50_Q5LPR2 Cluster: Enoyl-CoA hydratase/isomerase family
           protein; n=21; Alphaproteobacteria|Rep: Enoyl-CoA
           hydratase/isomerase family protein - Silicibacter
           pomeroyi
          Length = 262

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -3

Query: 145 RVFPSGRTAGLRHSDRFGLFARAVLTDKHYAHVHANVAPF 26
           RVF SGR  G   +   GL ARAV  D   A + A V P+
Sbjct: 161 RVFMSGRLFGAAEAVELGLLARAVPADGLAAAIEAEVTPY 200


>UniRef50_A7S1K7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 777

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -2

Query: 404 SNCERYQRINEKKMIYFFTK*TYKVKRDSIRNSMITVGIENKIYKLYE 261
           S+ ++Y  +  +   YF+TK   K KR+S ++ +I  G ++K Y + E
Sbjct: 271 SSSKKYMGLKRRSFAYFYTKLKRKSKRNSSQSVLIDDGQDHKYYAIKE 318


>UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Rep:
           DEAD-box helicase 5 - Plasmodium falciparum
          Length = 755

 Score = 33.1 bits (72), Expect = 3.2
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 366 NDIFFYKINV*SKERQYQKQYDHCWNRE*NI*II*NSQKKELYIER 229
           N+IF++K NV  K+R  +K+Y H  N+  NI +  N +      ER
Sbjct: 57  NEIFYFKKNVLIKKRNKEKRYTHSKNKGSNIFLNLNEENDNTVKER 102


>UniRef50_A6DDM8 Cluster: Type II and III secretion system
           protein:NolW-like protein; n=1; Caminibacter
           mediatlanticus TB-2|Rep: Type II and III secretion
           system protein:NolW-like protein - Caminibacter
           mediatlanticus TB-2
          Length = 579

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 389 YQRINEKKMIYFFTK*-TYKVKRDSIRNSMITVGIENKIYKLYEIHK 252
           Y ++N+     F TK  +YK+  + + NS+I VG +N +YKL  + K
Sbjct: 188 YPKLNQIATTLFNTKIYSYKIIPNDVSNSIILVGQKNVVYKLARVVK 234


>UniRef50_Q8F296 Cluster: Putative uncharacterized protein; n=2;
           Leptospira interrogans|Rep: Putative uncharacterized
           protein - Leptospira interrogans
          Length = 129

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -2

Query: 311 NSMITVGIENKIYKLYEIHKKRNFI*SGPSIRTYSCSKFRRDRFSWTMVAEYKRSTSISQ 132
           N   T  I+N I  L +  +K NF    P +  Y+ S      +   +++EYK +  ++Q
Sbjct: 58  NFKFTHNIKNLIASLPQEIEKPNFFKDLPILTDYAVSTRYPGDYEEILLSEYKTAIFLAQ 117

Query: 131 RTYRW 117
           +T+ W
Sbjct: 118 QTFDW 122


>UniRef50_Q3WJD8 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 297

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 93  PNRSECRKPAVRPLGNTRATLVFGDHRP 176
           P R  CR+P++RP+  TR     GD +P
Sbjct: 270 PGRRVCRRPSLRPMTRTRRIPTAGDRQP 297


>UniRef50_A0D423 Cluster: Chromosome undetermined scaffold_37, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_37,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 251

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 11/39 (28%), Positives = 26/39 (66%)
 Frame = -3

Query: 451 NTNIEIDYYNPKSNSLQIVKDINESMKKK*YIFLQNKRI 335
           N++ E+++YN  SN+L ++KD   + ++K Y+  + + +
Sbjct: 53  NSDNELEFYNSNSNALLLIKDTCRNTRRKFYLSQKRREL 91


>UniRef50_A4D170 Cluster: Oxysterol-binding protein; n=16;
           Eutheria|Rep: Oxysterol-binding protein - Homo sapiens
           (Human)
          Length = 820

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 129 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 239
           P+G T  TL VFGDH     +TS +   +S  RW   Y
Sbjct: 599 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 636


>UniRef50_A4D168 Cluster: Oxysterol-binding protein; n=11;
           Euteleostomi|Rep: Oxysterol-binding protein - Homo
           sapiens (Human)
          Length = 851

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 129 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 239
           P+G T  TL VFGDH     +TS +   +S  RW   Y
Sbjct: 630 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 667


>UniRef50_Q9H4L5 Cluster: Oxysterol-binding protein-related protein
           3; n=31; Euteleostomi|Rep: Oxysterol-binding
           protein-related protein 3 - Homo sapiens (Human)
          Length = 887

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 129 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 239
           P+G T  TL VFGDH     +TS +   +S  RW   Y
Sbjct: 666 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 703


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,859,156
Number of Sequences: 1657284
Number of extensions: 8140413
Number of successful extensions: 23137
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23136
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)