Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G23
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   3.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   3.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   3.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   3.3  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   3.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   3.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 68  SQNCTREKAKSV*VSQASGTSAGKYSCYACIRRPSSTKI 184
           S+N T EK+  + ++++   S G YS    + R   + +
Sbjct: 34  SENLTEEKSSLIDLTESEEKSGGSYSSNKNVSRADHSPV 72


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 433 DYYNPKSNS 407
           DYYNP +NS
Sbjct: 28  DYYNPNANS 36


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 427 YNPKSNSLQIVKDINESMKK 368
           YN KSN + ++K++ +   K
Sbjct: 151 YNDKSNYVTLIKEMRKEFDK 170


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 113 QASGTSAGKYSCYAC 157
           +ASG   G YSC  C
Sbjct: 92  RASGKHYGVYSCEGC 106


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 302 ITVGIENKIYKLYEIHKKRNFI*SG 228
           +T+G +NK+Y + +   +++ I SG
Sbjct: 10  MTLGQQNKMYNVIQHSPQQSIIVSG 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,356
Number of Sequences: 336
Number of extensions: 2223
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)