Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G23
         (474 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5219| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.092
SB_12655| Best HMM Match : Astacin (HMM E-Value=0)                     29   2.6  

>SB_5219| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 201

 Score = 33.5 bits (73), Expect = 0.092
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -2

Query: 404 SNCERYQRINEKKMIYFFTK*TYKVKRDSIRNSMITVGIENKIYKLYE 261
           S+ ++Y  +  +   YF+TK   K KR+S ++ +I  G ++K Y + E
Sbjct: 72  SSSKKYMGLKRRSFAYFYTKLKRKSKRNSSQSVLIDDGQDHKYYAIKE 119


>SB_12655| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 482

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 157 YSATIVHENRSRLNFEHE*VRIDGPLYIKFLFL*ISYNLYILFSI 291
           Y  T++HE    L F HE  R D   Y+K L+  I    +  F++
Sbjct: 346 YRGTVMHELMHALGFFHEHSRHDRDKYVKILWWNIEPGFFNNFNV 390


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,015,570
Number of Sequences: 59808
Number of extensions: 247801
Number of successful extensions: 795
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)