Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G22
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 265 4e-70
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 233 2e-60
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 154 1e-36
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 153 2e-36
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 149 3e-35
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 131 1e-29
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 98 1e-19
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 88 1e-16
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 88 1e-16
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 77 3e-13
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 66 4e-10
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 65 1e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 64 2e-09
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 63 4e-09
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 62 8e-09
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 60 3e-08
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 60 4e-08
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 60 4e-08
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 58 2e-07
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 57 2e-07
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 54 2e-06
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 53 5e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 51 2e-05
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 50 4e-05
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 50 4e-05
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 49 8e-05
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 47 3e-04
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 47 3e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 46 6e-04
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 8e-04
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 46 8e-04
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 45 0.001
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.002
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.002
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 42 0.013
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 41 0.017
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 39 0.068
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 39 0.090
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 36 0.63
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 36 0.84
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 1.1
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 35 1.5
UniRef50_UPI000023CDB9 Cluster: hypothetical protein FG09588.1; ... 34 1.9
UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sati... 34 2.6
UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB... 33 3.4
UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11; Clupeocephala... 33 5.9
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 33 5.9
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein precur... 32 7.8
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 265 bits (650), Expect = 4e-70
Identities = 125/143 (87%), Positives = 134/143 (93%)
Frame = +3
Query: 33 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 212
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 213 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 392
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 393 KVVKVANVSLLALYKEQKERPRS 461
KVVKVANVSLLALYK +KERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 233 bits (571), Expect = 2e-60
Identities = 107/142 (75%), Positives = 126/142 (88%)
Frame = +3
Query: 36 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 215
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 216 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFK 395
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 396 VVKVANVSLLALYKEQKERPRS 461
VVKV+ VSLLAL+KE+KE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 154 bits (374), Expect = 1e-36
Identities = 75/139 (53%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Frame = +3
Query: 42 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 221
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 222 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKV 398
+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGVRFKV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKV 126
Query: 399 VKVANVSLLALYKEQKERP 455
+KV VSL A+++ +K++P
Sbjct: 127 IKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 153 bits (372), Expect = 2e-36
Identities = 73/132 (55%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Frame = +3
Query: 63 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 242
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 243 RVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVS 419
R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF+V KV +VS
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVS 128
Query: 420 LLALYKEQKERP 455
L + ++++P
Sbjct: 129 LEEMVAGKRDKP 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 149 bits (362), Expect = 3e-35
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = +3
Query: 12 DRVRAIVMG-KPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVL 188
+RVRA G K G+ RK HRR QRWADK +KK+H G WK PF G+SHAKGIVL
Sbjct: 64 ERVRAWSCGAKTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVL 122
Query: 189 EKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 332
EK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 123 EKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 131 bits (316), Expect = 1e-29
Identities = 63/98 (64%), Positives = 73/98 (74%)
Frame = -3
Query: 463 YDLGLSFCSLYRARSDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGT 284
YDLG SF S ++A +T TLTTLNLTPG+SP A PL P PA TSSFSS +QPS GT
Sbjct: 5 YDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGT 64
Query: 283 NAVTFLPFLMSCTRTHLRMAEFGCLASTPTFSRTMPLA 170
AVTFLPFL++ T TH +AEFGCL S P FS+T+PLA
Sbjct: 65 KAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 98.3 bits (234), Expect = 1e-19
Identities = 55/139 (39%), Positives = 79/139 (56%)
Frame = -2
Query: 449 LLLFFVQS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCHF 270
L F +QS +R++ Y NHLK DSR++T S+ F+T+S N +I+ LN V+A I HE C
Sbjct: 4 LAQFDLQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDL 62
Query: 269 LAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSL 90
L VLNEL+ + L +G I L G N FF+ ++L MR + + L VGF V P L
Sbjct: 63 LPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLL 122
Query: 89 LATMIHVLARRANTPRFTH 33
+ ++ L + T H
Sbjct: 123 VPSVTAELPGSSETTTLAH 141
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +3
Query: 324 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEQKERPRS 461
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KE+KE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 88.2 bits (209), Expect = 1e-16
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +3
Query: 237 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 413
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 414 VSLLALYKEQKERP 455
VSL A+ +K++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 42 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 221
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 222 SAIRKCVRVQLIKN 263
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 77.0 bits (181), Expect = 3e-13
Identities = 45/120 (37%), Positives = 63/120 (52%)
Frame = -2
Query: 362 VAFTTESCN*HLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFED 183
+ F+T+S N + I+ LN V+A I HE C L VLNEL+ + L +G I L G N FF+
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 182 DALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHYDSANTIGPR 3
++L MR T + + L VGF V P L+ ++ L + T H A GPR
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHL--AGATGPR 118
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 66.5 bits (155), Expect = 4e-10
Identities = 40/90 (44%), Positives = 59/90 (65%)
Frame = +3
Query: 135 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 314
R NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G +++
Sbjct: 79 RKSKNPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNL 135
Query: 315 EENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
+E++ VL R G D+PGV+ K V+
Sbjct: 136 QEHNIVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 64.9 bits (151), Expect = 1e-09
Identities = 42/125 (33%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Frame = -2
Query: 446 LLFFV--QS*KRHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHECCH 273
L+FFV + R+ + L+ D+R++++SV+ ++E + + +V+ + T++ +E H
Sbjct: 15 LVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSH 74
Query: 272 FLAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPS 93
FL VL EL+++ L+NG + LLGF+ + F DDA +E + L SR H F + PS
Sbjct: 75 FLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC-FNVSCIVPS 132
Query: 92 LLATM 78
LL+++
Sbjct: 133 LLSSV 137
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 64.5 bits (150), Expect = 2e-09
Identities = 40/94 (42%), Positives = 59/94 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
++++E++ VLV GR + D PGV+ K V+
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 98
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 63.3 bits (147), Expect = 4e-09
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +3
Query: 150 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 329
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 330 VLVAGFGRKGHAVGDIPGVRFKVVK 404
VLV G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 62.1 bits (144), Expect = 8e-09
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G ++++E
Sbjct: 20 KAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQE 76
Query: 321 NDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 410
+ VLV G GR V D+PGVR+K+++ A
Sbjct: 77 HSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/79 (41%), Positives = 56/79 (70%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 354 KGHAVGDIPGVRFKVVKVA 410
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G K + + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ VLV
Sbjct: 77 GCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLV 133
Query: 339 AGFGRKGHAVGDIPGVRFKVVK 404
G G K D+PGVR+K+V+
Sbjct: 134 RGGGAK-----DLPGVRYKIVR 150
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 57.2 bits (132), Expect = 2e-07
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = +3
Query: 123 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 302
H+ R P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 303 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
++++E++ +++ GR V D PGV+ K V+
Sbjct: 117 GHNLQEHN-IVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 54.0 bits (124), Expect = 2e-06
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 321 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 52.8 bits (121), Expect = 5e-06
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+GI L V K+PNSA+RK RV+L G +VTA++P G ++++E+ VLV G GR
Sbjct: 31 RGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR 86
Query: 354 KGHAVGDIPGVRFKVVK 404
V D+PGVR+ +V+
Sbjct: 87 ----VKDLPGVRYHIVR 99
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +3
Query: 324 DEVLVAGFGRKGHAVGDIPGVRFKVVK 404
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 339 AGFGRK 356
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 50.0 bits (114), Expect = 4e-05
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 354 KGHAVGDIPGVRFKVVKVA 410
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 50.0 bits (114), Expect = 4e-05
Identities = 26/77 (33%), Positives = 53/77 (68%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+ ++ K+PNSA+RK +++L KN K++ A++P +G + +++++ VL+ +
Sbjct: 29 KGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----K 81
Query: 354 KGHAVGDIPGVRFKVVK 404
KG V D+PG+++KV++
Sbjct: 82 KGR-VQDLPGIKYKVIR 97
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 48.8 bits (111), Expect = 8e-05
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 339 AGFGRKGHAVGDIPGVRFKVVK 404
G GR D PGV++ VV+
Sbjct: 104 RG-GR----AQDCPGVQYHVVR 120
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +3
Query: 192 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAV 368
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 369 GDIPGVRFKVVKVA 410
D PGVR+ +V+ A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 47.2 bits (107), Expect = 3e-04
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +3
Query: 141 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 320
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 321 NDEVLVAGFGRKGHAVGDIPGVRFKVV 401
+D VLV +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 46.8 bits (106), Expect = 3e-04
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 354 KGHAVGDIPGVRFKVVK 404
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 390 FKVV 401
+KV+
Sbjct: 94 YKVI 97
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ L+ + K+PNS RK R++L NG VT ++P +G ++I+++ VL+
Sbjct: 105 GRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPGEG--HNIQQHSVVLI 161
Query: 339 AGFGRKGHAVGDIPGVRF 392
G GR D PGVR+
Sbjct: 162 RG-GR----AQDCPGVRY 174
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 45.6 bits (103), Expect = 8e-04
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 339 AGFGRKGHAVGDIPGVRFKVVK 404
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 45.2 bits (102), Expect = 0.001
Identities = 37/119 (31%), Positives = 60/119 (50%)
Frame = +3
Query: 48 GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 227
G T + + H RE++ H R +A G +G+ L K+PNSA
Sbjct: 63 GFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTRTPKKPNSA 111
Query: 228 IRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 404
+ K +V+L N V A++P +G ++++E+ VLV G GR V D+PGV+F ++
Sbjct: 112 LGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGVKFHCIR 162
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
KGI ++ K+PNSA RK +V L NGK + ++ +G + ++E+ VLV G GR
Sbjct: 31 KGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVRG-GR 86
Query: 354 KGHAVGDIPGVRFKVVK 404
V D+PGV++ V+
Sbjct: 87 ----VKDLPGVQYHFVR 99
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +3
Query: 177 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 356
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 357 GHAVGDIPGVRFKVVK 404
V D+PGV+F ++
Sbjct: 87 ---VKDLPGVKFHCIR 99
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 41.5 bits (93), Expect = 0.013
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 159 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 338
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 339 AGFGRKGHAVGDIPGVRFKVVK 404
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 41.1 bits (92), Expect = 0.017
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 354 KGHAVGDIPGVRFKVV 401
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 39.1 bits (87), Expect = 0.068
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 390 FKVVK 404
+K V+
Sbjct: 98 YKAVR 102
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 38.7 bits (86), Expect = 0.090
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +3
Query: 210 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 389
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 390 FKVVK 404
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 35.9 bits (79), Expect = 0.63
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G VL+ V K+PNSA R + +L N K V A +P G +++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 354 KGHAVGDIPGVRFKVVK 404
+ D+PGVR ++
Sbjct: 88 R-----DLPGVRHTCIR 99
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 35.5 bits (78), Expect = 0.84
Identities = 24/77 (31%), Positives = 43/77 (55%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
K I L+ + + K+PNSA R+ +V+ +K +T +P G ++++++ VL+ G GR
Sbjct: 32 KVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GR 88
Query: 354 KGHAVGDIPGVRFKVVK 404
D+ GV K V+
Sbjct: 89 S----KDLIGVHLKAVR 101
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 255 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 434
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 435 KEQKERPRS 461
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 34.7 bits (76), Expect = 1.5
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +3
Query: 174 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 353
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 354 KGHAVGDIPGVR 389
V D PG R
Sbjct: 119 ----VKDSPGKR 126
>UniRef50_UPI000023CDB9 Cluster: hypothetical protein FG09588.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09588.1 - Gibberella zeae PH-1
Length = 1464
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 419 ASSSVQRTEGEAQVIGLHCDK*VTRCRRRE 508
A+S+V+R E EAQ++ +H D + + RRRE
Sbjct: 730 ATSAVKRKEAEAQIVKIHFDHDIAKLRRRE 759
>UniRef50_Q3WB12 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 496
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 454 GLSFCSLYRARSDTFATLTTLNLTPGM-SPTAWPLRPNPATNTSS 323
GL +CS +R+ AT + PG SP AWP P + TSS
Sbjct: 287 GLPYCSGCASRTCGSATFVAIRSVPGTPSPAAWPASPWRSAGTSS 331
>UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Cell wall protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 398
Score = 33.9 bits (74), Expect = 2.6
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -3
Query: 451 LSFCSLYR-ARSDTFATLTTLNLTPGMSPTAW-PLRPNPA 338
++F SL+R AR+ T++T +T SP+A PLRPNPA
Sbjct: 187 VAFGSLFRRARAPADVTISTSGITAARSPSASPPLRPNPA 226
>UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB;
n=1; marine gamma proteobacterium HTCC2080|Rep: Putative
Mg2+ and Co2+ transporter CorB - marine gamma
proteobacterium HTCC2080
Length = 397
Score = 33.5 bits (73), Expect = 3.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -2
Query: 242 NTLTNG*IRLLGFNANFFEDDALSMR-----CTTEGVRLPSR 132
N++TNG ++L+GF + D+ALS T G R+PSR
Sbjct: 118 NSVTNGLLKLMGFRPDLQNDEALSQEELRTIVTESGTRIPSR 159
>UniRef50_Q2GWF5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 659
Score = 33.5 bits (73), Expect = 3.4
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -3
Query: 430 RARSDTFATLTTLNLT-PGMSPTAWPLRPNPA-TNTSSFSSMWLRQPS 293
R+ S T + L+LT P + P+A+PLRP PA T T +F L PS
Sbjct: 180 RSASTTSRSTNRLSLTLPIVPPSAYPLRPTPASTTTPAFPPTPLDTPS 227
>UniRef50_A4IG42 Cluster: Zgc:162193 protein; n=11;
Clupeocephala|Rep: Zgc:162193 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 912
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 421 SDTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQP 296
+ TF+ + LNL+P WP++PN N S + W P
Sbjct: 867 AQTFSKVVNLNLSPFFKAWGWPIQPNTEQNLSHLPA-WSDHP 907
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.7 bits (71), Expect = 5.9
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 KHVNHRREQ--RWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 239
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 240 VRVQLIK 260
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 507
Score = 32.7 bits (71), Expect = 5.9
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 108 EFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 287
+F+ G W N F A G + E + E K+PN++ + + + + +G TAF
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289
Query: 288 PRDGCLNHIEENDEV 332
CLN N+ V
Sbjct: 290 APIMCLNQAYYNEPV 304
>UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein
precursor; n=2; Proteobacteria|Rep: Putative
uncharacterized protein precursor - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 339
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 418 DTFATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSMWLRQPSRGTNAVTF 269
D+ +T TT+ TP +PTA P P P +++S+ + P GT T+
Sbjct: 31 DSSSTATTVTPTPSPTPTATP-TPTPTATGTAYSTASVDCPYSGTYTGTY 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,503,432
Number of Sequences: 1657284
Number of extensions: 13082183
Number of successful extensions: 33704
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 32521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33649
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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