Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G20
         (157 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   3.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   5.6  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 66  YIYLV*QESGMNNLSRFYMKKCELD 140
           +I +     G NN++  YM +C L+
Sbjct: 466 FILMTTVNEGNNNMAATYMNECLLN 490


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -2

Query: 141 HRVHISSCKTLK 106
           H +H+  CK L+
Sbjct: 95  HELHVHGCKVLR 106


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 96  MNNLSRFYMKKCEL 137
           +NN+ + Y  KCE+
Sbjct: 51  LNNIPKSYGIKCEI 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,282
Number of Sequences: 438
Number of extensions: 388
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)