Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G17
         (347 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XQ43 Cluster: Putative uncharacterized protein; n=1; ...    31   4.1  
UniRef50_UPI0000ECCF3B Cluster: Collagen alpha-1(XV) chain precu...    30   9.5  

>UniRef50_Q4XQ43 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 85

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 331 YTKYYIFFFTNNTVFLNKINI 269
           Y KY IF F N T+FL+ INI
Sbjct: 37  YYKYIIFLFNNFTIFLSNINI 57


>UniRef50_UPI0000ECCF3B Cluster: Collagen alpha-1(XV) chain
           precursor [Contains: Endostatin (Endostatin-XV) (Restin)
           (Related to endostatin)].; n=2; Gallus gallus|Rep:
           Collagen alpha-1(XV) chain precursor [Contains:
           Endostatin (Endostatin-XV) (Restin) (Related to
           endostatin)]. - Gallus gallus
          Length = 1274

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 322 YYIFFFTNNTVFLNKINICKIKNLR 248
           ++ FFF+N+TV    INIC I +++
Sbjct: 412 FFFFFFSNSTVSQRNINICLIPSIQ 436


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,185,697
Number of Sequences: 1657284
Number of extensions: 4061516
Number of successful extensions: 8360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8358
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)