Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G16
(383 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 177 3e-45
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 177 3e-45
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 176 4e-45
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 176 4e-45
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 176 4e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 176 4e-45
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 172 8e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 172 8e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 172 8e-44
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 3e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 115 1e-26
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 89 1e-18
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 84 3e-17
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 75 2e-14
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 70 5e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 56 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 45 2e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 42 1e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 36 0.007
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 32 0.11
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.35
At4g24680.1 68417.m03533 expressed protein 28 1.9
At2g33280.1 68415.m04079 integral membrane transporter family pr... 28 2.5
At3g05750.1 68416.m00646 expressed protein 27 3.3
At3g48860.2 68416.m05337 expressed protein 26 7.5
At3g48860.1 68416.m05336 expressed protein 26 7.5
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 26 7.5
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 26 7.5
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 7.5
At3g19680.1 68416.m02493 expressed protein 26 9.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 26 9.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 26 9.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 177 bits (430), Expect = 3e-45
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (430), Expect = 3e-45
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTF 92
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 4e-45
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 176 bits (429), Expect = 4e-45
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 4e-45
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 4e-45
Identities = 78/88 (88%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHGIV NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTF 92
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 172 bits (418), Expect = 8e-44
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHG+V+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTF 92
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 172 bits (418), Expect = 8e-44
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHG+V+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTF 92
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 172 bits (418), Expect = 8e-44
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GILTLKYPIEHG+V+NWDDMEKIWHHTF
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTF 92
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (405), Expect = 3e-42
Identities = 70/88 (79%), Positives = 83/88 (94%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 297
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 298 GILTLKYPIEHGIVTNWDDMEKIWHHTF 381
GIL+LKYPIEHG+V+NWDDMEKIWHHTF
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTF 93
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 115 bits (276), Expect = 1e-26
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 312
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 313 KYPIEHGIVTNWDDMEKIWHHTF 381
K P+EHGIV NWDDMEKIWH+TF
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTF 81
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 88.6 bits (210), Expect = 1e-18
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 306
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 307 TLKYPIEHGIVTNWDDMEKIWHHTF 381
+ YP+ +GIV NWDDME +W H F
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAF 91
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 84.2 bits (199), Expect = 3e-17
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +1
Query: 241 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 381
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTF
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTF 47
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 74.5 bits (175), Expect = 2e-14
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 16/104 (15%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 252
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 253 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 381
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAF 108
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 70.1 bits (164), Expect = 5e-13
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 22/110 (20%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 267
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 268 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 381
YVG +A S +R + + PI+ GIV++WD ++ IW H F
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAF 114
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 55.6 bits (128), Expect = 1e-08
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 21/101 (20%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 255
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 256 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIW 369
D Y+GDEA +K R T L YPIEHG V +WD ME+ W
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYW 105
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 312
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 313 -----KYPIEHGIVTNWDDMEKIWHHTF 381
+ P + +V ++ ME I + F
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAF 105
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 312
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 313 KYPIEHGIVTNWDDMEKIWHHTF 381
+ PI+ G + N D +IW H F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLF 84
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 36.3 bits (80), Expect = 0.007
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 306
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 307 TLKYPIEHGIVTNWDDMEKI 366
TL PIE G++ +WD ME +
Sbjct: 54 TLD-PIERGLIRDWDAMEDL 72
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 32.3 bits (70), Expect = 0.11
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 125 LPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTPT 271
LP WS ++ P+C V + AP R+ T+ SW ++ TPT
Sbjct: 396 LPPWSVSILPDCKTEVYNTAKVNAPSVHRNMVPTGTKFSWGSFNEATPT 444
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.35
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 254 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 117
P P + P RG +G T+ +SSPA+P + +P+ +ST + TS+
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 225 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQLGRYGEDLA 371
S G + GS L R E TQ P++ +HQ GR+GED A
Sbjct: 477 SGQGGYDTPGSSVSLER---NESSHSQETQRPYKVLLKHQDGRFGEDNA 522
>At2g33280.1 68415.m04079 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter
Length = 408
Score = 27.9 bits (59), Expect = 2.5
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 363 LLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSV 184
LL + G A+F G E + +A L++ +G +T DALV +YG
Sbjct: 30 LLQGLAWGSLAIFPGAREVLPSLMAFILLSNLGASITEVSQDALV-------AEYGLRYQ 82
Query: 183 VSRETGFAHSGPIVYDQRGNFLVAHCEL 100
++ +A V GN L +C L
Sbjct: 83 INGLQSYALMASAVGGILGNLLGGYCLL 110
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 3.3
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 294
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 295 RG--ILTLKYPIEHGIVTNWDDMEK 363
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 209 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 111
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 209 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 111
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 291 ALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSVVSRETGF 163
A+ LIT + +LL + ++ + H+ G+ ++ +ETGF
Sbjct: 131 AITLITLIPLLLKVKVREFMLKKKAHELGREVGLILIKKETGF 173
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +1
Query: 196 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 369
+V P GR QG VGMG + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 243
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At3g19680.1 68416.m02493 expressed protein
Length = 491
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 134 WS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTP 268
WS T+ PV+ ++ P+ P + VTR+S AW+ P
Sbjct: 265 WSITVHDLSGSPVAM-ASMVTPFVPSPGSNRVTRSSPGAWLILRP 308
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 277 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 369
D A L++KY + H I + W + +IW
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIW 199
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 277 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 369
D A L++KY + H I + W + +IW
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIW 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,497,099
Number of Sequences: 28952
Number of extensions: 173125
Number of successful extensions: 446
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 537681456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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