Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G13
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   0.90 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   0.90 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   4.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 100  QLRNLTPLCRIVKRSVKSLTKCAYPN 177
            QLR +    R + R ++SL K  YP+
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPD 1126


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 100  QLRNLTPLCRIVKRSVKSLTKCAYPN 177
            QLR +    R + R ++SL K  YP+
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPD 1126


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 272 VTGVHFAVINILR 234
           VT VH AV+NILR
Sbjct: 247 VTFVHLAVLNILR 259


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 167 AHLVRLFTDRFTIRHNGVRFLNWNASMVLLEILETDL 57
           AH + LF     IR NG+ + N+      L ++  DL
Sbjct: 30  AHFICLFPITINIRKNGLNY-NFTKKCYFLRMVLIDL 65


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 117 PVVSYRETVSEESDQMCLSKSPNKHNR 197
           P  + RET S ESD    S  P+   R
Sbjct: 123 PRTASRETKSSESDSGASSADPDDELR 149


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 75  LEEDHACIPIKKSDPVVSY 131
           L ED    PI+  +P+V Y
Sbjct: 66  LTEDLNSAPIRMKNPIVKY 84


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/49 (18%), Positives = 19/49 (38%)
 Frame = +3

Query: 243 IDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNILVDC 389
           +DD  V P  D     ++   + ++  ++     CF   G      ++C
Sbjct: 662 VDDSDVGPSGDCFYENKFYRQEAQWTSSDNPCTTCFCENGNNKCFTMEC 710


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,544
Number of Sequences: 336
Number of extensions: 1731
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)