Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G13
(417 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 195 1e-50
04_01_0103 + 1082077-1082167,1083037-1085477 190 3e-49
02_04_0017 + 18937774-18937864,18938505-18940945 190 3e-49
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 159 8e-40
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 127 4e-30
03_05_0511 + 25056018-25059107 60 9e-10
02_04_0148 - 20198407-20201424 57 7e-09
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 45 2e-05
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 37 0.006
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 30 0.86
04_03_0531 + 16817676-16818299 30 0.86
04_03_0424 + 15786147-15786213,15786751-15787037 28 2.6
11_06_0282 - 21884702-21885085 28 3.5
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 28 3.5
05_01_0518 + 4421314-4421346,4421427-4421767,4421960-4422619,442... 28 3.5
02_02_0340 + 9135846-9138377 27 4.6
08_01_0515 - 4490855-4490902,4490992-4491072,4491752-4491823,449... 27 6.0
06_02_0166 + 12522172-12522890,12523567-12524596 27 6.0
08_01_1032 + 10447474-10448030,10448784-10449813 27 8.0
08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011 27 8.0
03_05_0985 - 29424698-29425183 27 8.0
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 195 bits (476), Expect = 1e-50
Identities = 92/139 (66%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKS 179
T EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKS
Sbjct: 517 TVEESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKS 576
Query: 180 PNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPE 359
PNKHNRL+M+A+PM EGLPE ID+G++ PRDD K R++ LS+++ +D A+KIWCFGPE
Sbjct: 577 PNKHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPE 636
Query: 360 GTGPNILVDCSKGVQYLNE 416
TGPNI+VD KGVQYLNE
Sbjct: 637 TTGPNIVVDMCKGVQYLNE 655
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 190 bits (464), Expect = 3e-49
Identities = 90/139 (64%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKS 179
T EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKS
Sbjct: 521 TIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKS 580
Query: 180 PNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPE 359
PNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFGPE
Sbjct: 581 PNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPE 640
Query: 360 GTGPNILVDCSKGVQYLNE 416
TGPN++VD KGVQYLNE
Sbjct: 641 TTGPNMVVDMCKGVQYLNE 659
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 190 bits (464), Expect = 3e-49
Identities = 90/139 (64%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKS 179
T EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKS
Sbjct: 521 TIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKS 580
Query: 180 PNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPE 359
PNKHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFGPE
Sbjct: 581 PNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPE 640
Query: 360 GTGPNILVDCSKGVQYLNE 416
TGPN++VD KGVQYLNE
Sbjct: 641 TTGPNMVVDMCKGVQYLNE 659
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 159 bits (386), Expect = 8e-40
Identities = 77/147 (52%), Positives = 105/147 (71%), Gaps = 9/147 (6%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKS 179
T EESGEH++AG G+LHLEIC+KDL+ED I P+++YRETV++ S + +SKS
Sbjct: 523 TIEESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKS 582
Query: 180 PNKHNRLFMKAQPMP-EGLPED-------IDDGKVNPRDDFKTRARYLSDKYEYDLTEAR 335
PNKHNRL+M+A+P+ E L +D IDD ++ P+DD K R + LS+++ +D A+
Sbjct: 583 PNKHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAK 642
Query: 336 KIWCFGPEGTGPNILVDCSKGVQYLNE 416
KIW FGPE GPN+LVD KGVQYL+E
Sbjct: 643 KIWAFGPETKGPNLLVDMCKGVQYLSE 669
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 127 bits (306), Expect = 4e-30
Identities = 57/132 (43%), Positives = 88/132 (66%)
Frame = +3
Query: 9 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 188
EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PNK
Sbjct: 646 EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNK 705
Query: 189 HNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTG 368
N++ M A+P+ +GL EDI++G V+ K + +Y++D+ AR IW FGPE G
Sbjct: 706 RNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQG 765
Query: 369 PNILVDCSKGVQ 404
PNIL+D + V+
Sbjct: 766 PNILLDDTLSVE 777
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 59.7 bits (138), Expect = 9e-10
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEE 152
T + GEH++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E
Sbjct: 570 TVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGE 619
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = +3
Query: 3 TREESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEE---------- 152
T E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 550 TVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGEGAGIMESLKA 609
Query: 153 SDQMCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 257
S + +PN + +K +P + + I+D K
Sbjct: 610 SHEFVERTTPNGRFTVRVKVFRLPNAVTKVIEDSK 644
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/82 (31%), Positives = 46/82 (56%)
Frame = +3
Query: 12 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKH 191
ESGE I++G GELHL+I ++ + ++ + K P V++RET+++ ++ L K +
Sbjct: 515 ESGETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQSGG 573
Query: 192 NRLFMKAQPMPEGLPEDIDDGK 257
+ + E LP + DGK
Sbjct: 574 QGQYGRVCGYIEPLPSE-SDGK 594
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 9 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSK 176
EE+ + ++ G GELHL+I + L+ + + P V+YRE++S+ S+ + K
Sbjct: 494 EETNQTVIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRESISKISEVQYVHK 548
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -2
Query: 392 RAVDEDVRSGALGAEAPDLTRFGQIVLVLVAEVTGAGLEVVTGVHFAV 249
RA+DED AL E DL R + LVLV E G G+ G F V
Sbjct: 160 RAIDEDELLDALDGE--DLERAHEQALVLVHEAGGIGVGHADGKVFGV 205
>04_03_0531 + 16817676-16818299
Length = 207
Score = 29.9 bits (64), Expect = 0.86
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 97 MQAWSSSRSLRQIS-RCNSPAPATMC 23
+Q WSS+ ++R S C PAPAT C
Sbjct: 177 LQQWSSTAAVRGTSIYCRPPAPATQC 202
>04_03_0424 + 15786147-15786213,15786751-15787037
Length = 117
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 202 KRRLCLLGDLDKHIWSDSSLTVSRYDTT--GSDFLIGMQAWSSSRSLR 65
K +C + D IW++ S S D+T GS +I +S RSLR
Sbjct: 13 KYEICSIFDKCSSIWNEDSAVESGSDSTCRGSSSIISTSETASLRSLR 60
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 240 DIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 338
++D G V+P DDF ++ Y+ + DL RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 150 ESDQMCLSKSPNKHNRLFMKAQPMPEGLPE 239
E + +CL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>05_01_0518 +
4421314-4421346,4421427-4421767,4421960-4422619,
4422992-4423116,4423337-4423692,4423768-4423852,
4423917-4423954
Length = 545
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 248 INILRQTFRHGLGLHEET-VVLVGRFG*AHLVRLFTDRFTI 129
+N+LR ++H GL +E VLV R G ++ +T F I
Sbjct: 487 VNLLRNRYKHFNGLPDEVKAVLVNRKGLVKIISEWTPNFWI 527
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 124 TTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCS 20
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>08_01_0515 -
4490855-4490902,4490992-4491072,4491752-4491823,
4492296-4492373,4493316-4493444,4493862-4493942,
4494064-4494205,4494672-4494865,4494962-4495027,
4495108-4495194,4495326-4495376
Length = 342
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 130 YDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSL 5
+ T GSD S + L+ SRC P P + + D S+
Sbjct: 255 FATAGSDGAFNFWDKDSKQRLKAFSRCPLPIPCSTFNSDGSI 296
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 395 LRAVDEDVRSGALGAEAPDLTRFGQIVLVLVAEVTGAGLEVVTGVHFAVINILRQTFRHG 216
L AV +V GALG +G +L++V G+GL V A+ ++ F G
Sbjct: 83 LGAVAGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGLSVCRTRRCALASLCFFRFLLG 142
Query: 215 LGL 207
+G+
Sbjct: 143 VGV 145
>08_01_1032 + 10447474-10448030,10448784-10449813
Length = 528
Score = 26.6 bits (56), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = +3
Query: 318 DLTEARKIW------CFGPEGTGPNILVDC 389
D+ EA++IW C P+GT ++V C
Sbjct: 262 DIAEAKRIWREMSNYCITPDGTSYTLMVSC 291
>08_01_0314 + 2777971-2778607,2778809-2778885,2778964-2779011
Length = 253
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +3
Query: 57 EICLKDLEEDHACIPIKKSDPVVSYRETVSEESD 158
E+CL+D++ +P P++ + E+SD
Sbjct: 174 ELCLQDVDVGGVFVPCSSDHPIIHLADLPPEQSD 207
>03_05_0985 - 29424698-29425183
Length = 161
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 237 EDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 338
ED D G ++PR D K R+L KY L RK
Sbjct: 8 EDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRK 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,844,637
Number of Sequences: 37544
Number of extensions: 221246
Number of successful extensions: 815
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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