Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G13
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   0.34 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   7.4  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              20   9.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   9.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   9.7  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 351 GPEGTGPNILVDCSKGVQYLNE 416
           GP   GP+ ++D + GV Y  +
Sbjct: 294 GPNSQGPSSVIDTNTGVDYFTQ 315


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 213 QPMPEGLPEDIDDGKVNPR 269
           +P+PE L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 213 QPMPEGLPEDIDDGKVNPR 269
           +P+PE L ED+   +V PR
Sbjct: 20  KPLPENLKEDLIVYQVYPR 38


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 240 DIDDGKVNPRDD 275
           D++DGK+N  D+
Sbjct: 46  DVNDGKINIEDE 57


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 204 MKAQPMPEGLPEDIDDGKVNPRDD 275
           MK     + + +DI++GK+N  D+
Sbjct: 34  MKEIGTAQQIIDDINEGKINMDDE 57


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 10  KSLANTLSPVPASCIL 57
           +++ NTL  + ASC++
Sbjct: 239 RAIINTLLSISASCVI 254


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 37 VPASCILRSVSRISRRTML 93
          + A C+ R  +RISR  +L
Sbjct: 28 ISAGCVSRISNRISRNRVL 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,098
Number of Sequences: 438
Number of extensions: 1669
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)