Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G12
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   9.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   9.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   9.3  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 375 YEVYQKYYFNVKASLLETYFKNFI 446
           Y VY++ Y N   S ++   +N +
Sbjct: 49  YSVYERRYMNAHLSGIQLVVRNLL 72


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 330 SDSMVASVSLLPLIRYEVYQKYY 398
           +D + A +S+LP + +++  ++Y
Sbjct: 85  ADLITAFLSVLPQLAWDITYRFY 107


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 34  SPHLKTSAMLKSPPQID 84
           SP+ K SA    PPQ++
Sbjct: 220 SPNSKKSATPSPPPQLE 236


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 193 HHPPYRRHLHKDP 155
           HH P   HL ++P
Sbjct: 348 HHNPMSHHLKQEP 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,889
Number of Sequences: 336
Number of extensions: 1411
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)